Definition Halobacterium sp. NRC-1 plasmid pNRC200, complete sequence.
Accession NC_002608
Length 365,425

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Identifier: 16120285

GI number: 16120285

Start: 311629

End: 312180

Strand: Direct

Name: Not Available

Synonym: VNG6397H

Alternate gene names: NA

Gene position: 311629-312180 (Clockwise)

Preceding gene: 16120284

Following gene: 16120293

Centisome position: 85.28

GC content: 63.04

Gene sequence:

>552_bases
ATGTCCGAATCCCCGCAGGACGGCGTTCAGTCGTGGAGTGAGTCGATGACCGCCCGCGAACGCATTCGGGCGGTCGCCGA
GACGCTTCGCGAACCGCGGTCGGTCAACTGGATCAGCGAGCAGGCTGACGCCGCCTGGAGTACGACTAACGAGGAACTCC
AAGATCTCGTCAACCAAGGCCAGCTGCGCCGCGTTGAGGCCGGCGAAACCACGCGCTATCTACCGGACTACACGCGCCTG
CTCTTCGAAGAGATCCGGACGCTCATCGAGGAAAACACCCGCGAGGAGCTGCGGAGCGAATTGGCCGCAATCACCGAGGA
GATCGAGGCGTGGCAGGCGACCTACGACGTCGAGACGTGGGAGGAGCTCGAACAGTCGCTTGCCGACGGCGACCTCTCAA
GTGACGAGCTTCACGAACGCCGTGACGTGATCACGCGCTGGGAGGAGAATCTGGAAGACCGTCGCCTCATCAAGCACGCG
CTGGCGCTCTACTCGGATGTCGAAGCCGCTCGCGAACAGCGGATCAATGTGGCTGACCGCGCCGCAAACTAA

Upstream 100 bases:

>100_bases
ACGCCTCAGGGGTCGATCACATCCTCACCTACGACCGGCACTACGATGCGTTCGACGTGACAACGCTTCCGTATCGCAAT
CAGGACTAGCGGTGCCAAGT

Downstream 100 bases:

>100_bases
TTCTCGTGATCTTCGAACATACGGGTGTCATCGAAGGGGACACAACTACTCGCAGGACTGCTCGCCAAGCTTCTCTCGAA
GCTCGACTGCTGCCTTTTCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 183; Mature: 182

Protein sequence:

>183_residues
MSESPQDGVQSWSESMTARERIRAVAETLREPRSVNWISEQADAAWSTTNEELQDLVNQGQLRRVEAGETTRYLPDYTRL
LFEEIRTLIEENTREELRSELAAITEEIEAWQATYDVETWEELEQSLADGDLSSDELHERRDVITRWEENLEDRRLIKHA
LALYSDVEAAREQRINVADRAAN

Sequences:

>Translated_183_residues
MSESPQDGVQSWSESMTARERIRAVAETLREPRSVNWISEQADAAWSTTNEELQDLVNQGQLRRVEAGETTRYLPDYTRL
LFEEIRTLIEENTREELRSELAAITEEIEAWQATYDVETWEELEQSLADGDLSSDELHERRDVITRWEENLEDRRLIKHA
LALYSDVEAAREQRINVADRAAN
>Mature_182_residues
SESPQDGVQSWSESMTARERIRAVAETLREPRSVNWISEQADAAWSTTNEELQDLVNQGQLRRVEAGETTRYLPDYTRLL
FEEIRTLIEENTREELRSELAAITEEIEAWQATYDVETWEELEQSLADGDLSSDELHERRDVITRWEENLEDRRLIKHAL
ALYSDVEAAREQRINVADRAAN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21323; Mature: 21192

Theoretical pI: Translated: 4.12; Mature: 4.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSESPQDGVQSWSESMTARERIRAVAETLREPRSVNWISEQADAAWSTTNEELQDLVNQG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHCCC
QLRRVEAGETTRYLPDYTRLLFEEIRTLIEENTREELRSELAAITEEIEAWQATYDVETW
CHHHHHCCCCHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHH
EELEQSLADGDLSSDELHERRDVITRWEENLEDRRLIKHALALYSDVEAAREQRINVADR
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
AAN
CCC
>Mature Secondary Structure 
SESPQDGVQSWSESMTARERIRAVAETLREPRSVNWISEQADAAWSTTNEELQDLVNQG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHCCC
QLRRVEAGETTRYLPDYTRLLFEEIRTLIEENTREELRSELAAITEEIEAWQATYDVETW
CHHHHHCCCCHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHH
EELEQSLADGDLSSDELHERRDVITRWEENLEDRRLIKHALALYSDVEAAREQRINVADR
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
AAN
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA