| Definition | Halobacterium sp. NRC-1 plasmid pNRC200, complete sequence. |
|---|---|
| Accession | NC_002608 |
| Length | 365,425 |
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Identifier: 16120285
GI number: 16120285
Start: 311629
End: 312180
Strand: Direct
Name: Not Available
Synonym: VNG6397H
Alternate gene names: NA
Gene position: 311629-312180 (Clockwise)
Preceding gene: 16120284
Following gene: 16120293
Centisome position: 85.28
GC content: 63.04
Gene sequence:
>552_bases ATGTCCGAATCCCCGCAGGACGGCGTTCAGTCGTGGAGTGAGTCGATGACCGCCCGCGAACGCATTCGGGCGGTCGCCGA GACGCTTCGCGAACCGCGGTCGGTCAACTGGATCAGCGAGCAGGCTGACGCCGCCTGGAGTACGACTAACGAGGAACTCC AAGATCTCGTCAACCAAGGCCAGCTGCGCCGCGTTGAGGCCGGCGAAACCACGCGCTATCTACCGGACTACACGCGCCTG CTCTTCGAAGAGATCCGGACGCTCATCGAGGAAAACACCCGCGAGGAGCTGCGGAGCGAATTGGCCGCAATCACCGAGGA GATCGAGGCGTGGCAGGCGACCTACGACGTCGAGACGTGGGAGGAGCTCGAACAGTCGCTTGCCGACGGCGACCTCTCAA GTGACGAGCTTCACGAACGCCGTGACGTGATCACGCGCTGGGAGGAGAATCTGGAAGACCGTCGCCTCATCAAGCACGCG CTGGCGCTCTACTCGGATGTCGAAGCCGCTCGCGAACAGCGGATCAATGTGGCTGACCGCGCCGCAAACTAA
Upstream 100 bases:
>100_bases ACGCCTCAGGGGTCGATCACATCCTCACCTACGACCGGCACTACGATGCGTTCGACGTGACAACGCTTCCGTATCGCAAT CAGGACTAGCGGTGCCAAGT
Downstream 100 bases:
>100_bases TTCTCGTGATCTTCGAACATACGGGTGTCATCGAAGGGGACACAACTACTCGCAGGACTGCTCGCCAAGCTTCTCTCGAA GCTCGACTGCTGCCTTTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MSESPQDGVQSWSESMTARERIRAVAETLREPRSVNWISEQADAAWSTTNEELQDLVNQGQLRRVEAGETTRYLPDYTRL LFEEIRTLIEENTREELRSELAAITEEIEAWQATYDVETWEELEQSLADGDLSSDELHERRDVITRWEENLEDRRLIKHA LALYSDVEAAREQRINVADRAAN
Sequences:
>Translated_183_residues MSESPQDGVQSWSESMTARERIRAVAETLREPRSVNWISEQADAAWSTTNEELQDLVNQGQLRRVEAGETTRYLPDYTRL LFEEIRTLIEENTREELRSELAAITEEIEAWQATYDVETWEELEQSLADGDLSSDELHERRDVITRWEENLEDRRLIKHA LALYSDVEAAREQRINVADRAAN >Mature_182_residues SESPQDGVQSWSESMTARERIRAVAETLREPRSVNWISEQADAAWSTTNEELQDLVNQGQLRRVEAGETTRYLPDYTRLL FEEIRTLIEENTREELRSELAAITEEIEAWQATYDVETWEELEQSLADGDLSSDELHERRDVITRWEENLEDRRLIKHAL ALYSDVEAAREQRINVADRAAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21323; Mature: 21192
Theoretical pI: Translated: 4.12; Mature: 4.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSESPQDGVQSWSESMTARERIRAVAETLREPRSVNWISEQADAAWSTTNEELQDLVNQG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHCCC QLRRVEAGETTRYLPDYTRLLFEEIRTLIEENTREELRSELAAITEEIEAWQATYDVETW CHHHHHCCCCHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHH EELEQSLADGDLSSDELHERRDVITRWEENLEDRRLIKHALALYSDVEAAREQRINVADR HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH AAN CCC >Mature Secondary Structure SESPQDGVQSWSESMTARERIRAVAETLREPRSVNWISEQADAAWSTTNEELQDLVNQG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHCCC QLRRVEAGETTRYLPDYTRLLFEEIRTLIEENTREELRSELAAITEEIEAWQATYDVETW CHHHHHCCCCHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHH EELEQSLADGDLSSDELHERRDVITRWEENLEDRRLIKHALALYSDVEAAREQRINVADR HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH AAN CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA