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Identifier: 16120284

GI number: 16120284

Start: 311246

End: 311617

Strand: Direct

Name: Not Available

Synonym: VNG6396H

Alternate gene names: NA

Gene position: 311246-311617 (Clockwise)

Preceding gene: 16120275

Following gene: 16120285

Centisome position: 85.17

GC content: 57.53

Gene sequence:

>372_bases
ATGCACGCAGTCTCGCGGGCGTTCATGACCTTTGTCCGCGACGGTGACCTCCCCTATCGTCGCCTCATCGTCAACGATCA
CATCGTCGACGAGGCTGCCACACGGCTGAAAAAGCAAGCGTCAATGCGGAACGCAGCCTCGTTCCTGACGACGCTCGACG
AGAGTACGCTCTACCAGTTCGAATCCGTCTCCGAGGACGTTTTCGATGACGCCAAAGCAACGTTCGTCGAGTGGACGGAT
CTGGATGCGTCACTCACCGATTTCACTGTTGCAGCCCATATGGACGCCTCAGGGGTCGATCACATCCTCACCTACGACCG
GCACTACGATGCGTTCGACGTGACAACGCTTCCGTATCGCAATCAGGACTAG

Upstream 100 bases:

>100_bases
ATTCCTTCCGAAAGGTGCCTCGATAAGCCGCCGCTATCACGCGGTTTCTCGCTTAACTAAAGACGGATGCCTGTACGCAT
TATTCAACCCACAAGATCGG

Downstream 100 bases:

>100_bases
CGGTGCCAAGTATGTCCGAATCCCCGCAGGACGGCGTTCAGTCGTGGAGTGAGTCGATGACCGCCCGCGAACGCATTCGG
GCGGTCGCCGAGACGCTTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MHAVSRAFMTFVRDGDLPYRRLIVNDHIVDEAATRLKKQASMRNAASFLTTLDESTLYQFESVSEDVFDDAKATFVEWTD
LDASLTDFTVAAHMDASGVDHILTYDRHYDAFDVTTLPYRNQD

Sequences:

>Translated_123_residues
MHAVSRAFMTFVRDGDLPYRRLIVNDHIVDEAATRLKKQASMRNAASFLTTLDESTLYQFESVSEDVFDDAKATFVEWTD
LDASLTDFTVAAHMDASGVDHILTYDRHYDAFDVTTLPYRNQD
>Mature_123_residues
MHAVSRAFMTFVRDGDLPYRRLIVNDHIVDEAATRLKKQASMRNAASFLTTLDESTLYQFESVSEDVFDDAKATFVEWTD
LDASLTDFTVAAHMDASGVDHILTYDRHYDAFDVTTLPYRNQD

Specific function: Unknown

COG id: COG2402

COG function: function code R; Predicted nucleic acid-binding protein, contains PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14047; Mature: 14047

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHAVSRAFMTFVRDGDLPYRRLIVNDHIVDEAATRLKKQASMRNAASFLTTLDESTLYQF
CCHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
ESVSEDVFDDAKATFVEWTDLDASLTDFTVAAHMDASGVDHILTYDRHYDAFDVTTLPYR
HHHHHHHHCCCHHEEEEECCCCCCCHHEEEEECCCCCCCHHEEECCCCCCCCCCEECCCC
NQD
CCC
>Mature Secondary Structure
MHAVSRAFMTFVRDGDLPYRRLIVNDHIVDEAATRLKKQASMRNAASFLTTLDESTLYQF
CCHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
ESVSEDVFDDAKATFVEWTDLDASLTDFTVAAHMDASGVDHILTYDRHYDAFDVTTLPYR
HHHHHHHHCCCHHEEEEECCCCCCCHHEEEEECCCCCCCHHEEECCCCCCCCCCEECCCC
NQD
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA