| Definition | Halobacterium sp. NRC-1 plasmid pNRC200, complete sequence. |
|---|---|
| Accession | NC_002608 |
| Length | 365,425 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 16120280
GI number: 16120280
Start: 308579
End: 308740
Strand: Reverse
Name: Not Available
Synonym: VNG6390H
Alternate gene names: NA
Gene position: 308740-308579 (Counterclockwise)
Preceding gene: 16120281
Following gene: 16120279
Centisome position: 84.49
GC content: 60.49
Gene sequence:
>162_bases ATGCGAATCCGGGACAAACCACACCAACCGATGCGTGATCGCCATCTGGATTTCGAGGAACTACGGCCGACCGGCGAGGC GTCCCACATTCCGGACACGAGGCTGGACGACGGCTGTGAGAGTGAGGAGCTCTGGATCGTACCCGCTGACGTCCACTTCT GA
Upstream 100 bases:
>100_bases CTAGCTAAATTAATATCGGATTGGTCTTGGGCGAATAGAAATCTTCTCTTCACTGTTCAGCCCTACGCCATGTGGCGGTT TCGCTCTTAACTAAAGACGA
Downstream 100 bases:
>100_bases ATGCCTCGCATCACCAACTGGCGACGCGAGAGTCGCCGCCAGCGTTTTAACCAACAACTCTATCGATTCGGTTGTAGTGT TGGTTAAGACTTGACGACAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 53; Mature: 53
Protein sequence:
>53_residues MRIRDKPHQPMRDRHLDFEELRPTGEASHIPDTRLDDGCESEELWIVPADVHF
Sequences:
>Translated_53_residues MRIRDKPHQPMRDRHLDFEELRPTGEASHIPDTRLDDGCESEELWIVPADVHF >Mature_53_residues MRIRDKPHQPMRDRHLDFEELRPTGEASHIPDTRLDDGCESEELWIVPADVHF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6295; Mature: 6295
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIRDKPHQPMRDRHLDFEELRPTGEASHIPDTRLDDGCESEELWIVPADVHF CCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCC >Mature Secondary Structure MRIRDKPHQPMRDRHLDFEELRPTGEASHIPDTRLDDGCESEELWIVPADVHF CCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA