Definition Halobacterium sp. NRC-1 plasmid pNRC200, complete sequence.
Accession NC_002608
Length 365,425

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Identifier: 16120278

GI number: 16120278

Start: 307015

End: 307326

Strand: Reverse

Name: Not Available

Synonym: VNG6387H

Alternate gene names: NA

Gene position: 307326-307015 (Counterclockwise)

Preceding gene: 16120279

Following gene: 16120277

Centisome position: 84.1

GC content: 56.73

Gene sequence:

>312_bases
ATGAGTGAATCAGAGTCTGAAAAAGTCGTCTCGGTATCCTCTCGCGGACAGGCGACGATCCCGAAAGAGTTTCGCGAGGA
ACTAGGGATCGATACTCCCGGCCGGGTAAAGTTCGTTCGCACCGACGAAGGGGAGGTCATCGTTCGTCCCATTCAGTCGG
CCACGGACCTTCGCGGCATCTTGGCGGGAAAGACCGACGACCAAGGGAACTCGGCAGTCGAACGGCTGCGTGAGGAACGA
AAACAGGACAAAGCTAGTGACGAGGAGCTGCAGGAGCGGTATGTCGGTCGCGATACTGAGGATACGAAATGA

Upstream 100 bases:

>100_bases
CGATCGGCTGCTCTCCATCGTAGAATAGAGAGCTCGTATAGCCGTTAGGTTGCCCGTCAAGCCCATATATGAGTGTGGTA
AAGTAATGGGTAGAGAAAGT

Downstream 100 bases:

>100_bases
CAGCAGCACGTGAGCATCCCGACACTATCGTTTTCGACACGGAACCGCTAGTTGCGTACTTCTGTGATGAGCCGGGTAGT
GACACCGTCGAAACCTACAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 103; Mature: 102

Protein sequence:

>103_residues
MSESESEKVVSVSSRGQATIPKEFREELGIDTPGRVKFVRTDEGEVIVRPIQSATDLRGILAGKTDDQGNSAVERLREER
KQDKASDEELQERYVGRDTEDTK

Sequences:

>Translated_103_residues
MSESESEKVVSVSSRGQATIPKEFREELGIDTPGRVKFVRTDEGEVIVRPIQSATDLRGILAGKTDDQGNSAVERLREER
KQDKASDEELQERYVGRDTEDTK
>Mature_102_residues
SESESEKVVSVSSRGQATIPKEFREELGIDTPGRVKFVRTDEGEVIVRPIQSATDLRGILAGKTDDQGNSAVERLREERK
QDKASDEELQERYVGRDTEDTK

Specific function: Unknown

COG id: COG2002

COG function: function code K; Regulators of stationary/sporulation gene expression

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11568; Mature: 11437

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSESESEKVVSVSSRGQATIPKEFREELGIDTPGRVKFVRTDEGEVIVRPIQSATDLRGI
CCCCCCCCEEECCCCCCCCCCHHHHHHCCCCCCCCEEEEECCCCCEEEECCHHHHHHHHH
LAGKTDDQGNSAVERLREERKQDKASDEELQERYVGRDTEDTK
HCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SESESEKVVSVSSRGQATIPKEFREELGIDTPGRVKFVRTDEGEVIVRPIQSATDLRGI
CCCCCCCEEECCCCCCCCCCHHHHHHCCCCCCCCEEEEECCCCCEEEECCHHHHHHHHH
LAGKTDDQGNSAVERLREERKQDKASDEELQERYVGRDTEDTK
HCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA