Definition Halobacterium sp. NRC-1 plasmid pNRC200, complete sequence.
Accession NC_002608
Length 365,425

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Identifier: 16120274

GI number: 16120274

Start: 303732

End: 304292

Strand: Reverse

Name: Not Available

Synonym: VNG6381H

Alternate gene names: 16120274

Gene position: 304292-303732 (Counterclockwise)

Preceding gene: 16120276

Following gene: 16120273

Centisome position: 83.27

GC content: 65.42

Gene sequence:

>561_bases
ATGGTCGGGCCGGGGAGGAAACACCCATTAACTGTTGGTACAATTTTTTGGGACATGTCAGCCGAGCCAATTGCGACCTT
CGAGTCGTCACTCGACGAAGTCGGCGTCGAACTCGTGCGAACCACGGCCGACGAGTTCGCGTCGACGCTTTCACCCCTGC
TCGACGCGCCCACAGTCGGCACCTCACTCCCCTTCGAGACCGTCTCGCTGCCGGACAGCGTCGAGACCGATCCGTCGATC
GCGGACCTCGAGGCCGCGGCGACCGGCGTCACTGCTGCCGGCTACGGCATCGCCGACTACGGTTCGGTGATCATCCAGGG
CGGTACCGACGGTGAGGAGCCGGTGAGTCTCTACGCGGACGAACACGTCGCCGTCGTCGCCGCCAGCGACGTACTCCCGG
ACATGGACGCGACGTTCGACCAGCTCGCCGAGGACATCCGGAACGGCGTCGGACAGTCCATCATCGCGACGGGGCCGAGC
GCAACCGCAGACATGGGCGCGCTCGTGACGGGCGCTCACGGCCCGATGGATGTGACGGTCGTACTTCTGGAGGGCAAGTA
G

Upstream 100 bases:

>100_bases
TTGGGCCATCTCATAACCATCCATATGTAACTTACTTTCTGCATGATATGTACCTGCAAATACGGCCGGATCGGGCGATT
ATCCATAACGAAAGAAAATC

Downstream 100 bases:

>100_bases
ATGAGCGCCGACACCCGCCGGCAGAAGGCCGAGCGCATCCGCCATCTCCTCGACACCGAGGGCGACGCCGTCCACGAGAA
CACCCAGGTCTTCAACGAGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MVGPGRKHPLTVGTIFWDMSAEPIATFESSLDEVGVELVRTTADEFASTLSPLLDAPTVGTSLPFETVSLPDSVETDPSI
ADLEAAATGVTAAGYGIADYGSVIIQGGTDGEEPVSLYADEHVAVVAASDVLPDMDATFDQLAEDIRNGVGQSIIATGPS
ATADMGALVTGAHGPMDVTVVLLEGK

Sequences:

>Translated_186_residues
MVGPGRKHPLTVGTIFWDMSAEPIATFESSLDEVGVELVRTTADEFASTLSPLLDAPTVGTSLPFETVSLPDSVETDPSI
ADLEAAATGVTAAGYGIADYGSVIIQGGTDGEEPVSLYADEHVAVVAASDVLPDMDATFDQLAEDIRNGVGQSIIATGPS
ATADMGALVTGAHGPMDVTVVLLEGK
>Mature_186_residues
MVGPGRKHPLTVGTIFWDMSAEPIATFESSLDEVGVELVRTTADEFASTLSPLLDAPTVGTSLPFETVSLPDSVETDPSI
ADLEAAATGVTAAGYGIADYGSVIIQGGTDGEEPVSLYADEHVAVVAASDVLPDMDATFDQLAEDIRNGVGQSIIATGPS
ATADMGALVTGAHGPMDVTVVLLEGK

Specific function: Unknown

COG id: COG1556

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18977; Mature: 18977

Theoretical pI: Translated: 3.58; Mature: 3.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGPGRKHPLTVGTIFWDMSAEPIATFESSLDEVGVELVRTTADEFASTLSPLLDAPTVG
CCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TSLPFETVSLPDSVETDPSIADLEAAATGVTAAGYGIADYGSVIIQGGTDGEEPVSLYAD
CCCCCEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCEEEECC
EHVAVVAASDVLPDMDATFDQLAEDIRNGVGQSIIATGPSATADMGALVTGAHGPMDVTV
CEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEECCCCCCEEEE
VLLEGK
EEEECC
>Mature Secondary Structure
MVGPGRKHPLTVGTIFWDMSAEPIATFESSLDEVGVELVRTTADEFASTLSPLLDAPTVG
CCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TSLPFETVSLPDSVETDPSIADLEAAATGVTAAGYGIADYGSVIIQGGTDGEEPVSLYAD
CCCCCEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCEEEECC
EHVAVVAASDVLPDMDATFDQLAEDIRNGVGQSIIATGPSATADMGALVTGAHGPMDVTV
CEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEECCCCCCEEEE
VLLEGK
EEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA