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Identifier: 16120273

GI number: 16120273

Start: 301548

End: 303731

Strand: Reverse

Name: Not Available

Synonym: VNG6379C

Alternate gene names: 16120273

Gene position: 303731-301548 (Counterclockwise)

Preceding gene: 16120274

Following gene: 16120271

Centisome position: 83.12

GC content: 65.48

Gene sequence:

>2184_bases
ATGAGCGCCGACACCCGCCGGCAGAAGGCCGAGCGCATCCGCCATCTCCTCGACACCGAGGGCGACGCCGTCCACGAGAA
CACCCAGGTCTTCAACGAGGGCCGGTACGAGTCCACCGCGAATCTCGATGACTACGACGAGTTGAAAAACGAGGCTCGTG
CCATCAAGGAAGACGCCATCGAACGCCTCCCTGAACTGATCGACCAGGTCACCGAGGCCGTCGAAGCCAACGGCGGCAGC
GTCTACGTCGCCGACGACGCCGCCGACGCGAACCGATACATGGAGGAGGTCGTCGACGGCCGCGACGTGGTGAAGTCAAA
GTCGATGACCAGTGAGGAGATCGAGGTCAACGAGTCGCTTGAGGCACGCGGCGGGGACGTCTGGGAGACCGACCTCGCAG
AGTTCGTCCTCCAGGTCGCCGACGAGGCCCCCTCACACATCGTCGCCCCGGCGATCCACAAGTCCCGCGAGGAGATCGCA
ACCCTGTTCAACGAGGTGTTCGACCCCGAGGAACCCTTGGAGACTGCCGAGGAGCTGACGCGATTCGCTCGTGAGTACCT
CGGCGAGAAGATCCTGGACGCCGAGGTCGGGATGACGGGCGCGAACTTCGTTACCGCGGACACCGGCACGCTCGCGCTCG
TCACGAGTGAGGGGAACGCCCGCAAGTGCGTGCAAGCGACGGACACCCACGTCGCAGTCGCGGGTGTCGAGAAACTCGTC
CCGAGTGTCGAGGATCTCCAGCCGTTCGTCGAACTGATCGGGCGGTCCGGGACCGGCCAGGACATCACCTCCTACGTCTC
GCTGTTCACCCCGCCGAGTGACTCCCCCACGTTCGGCGGGAACGAACTCGAATCCGGCGACGACCGCGAGTTCCACCTCG
TGCTCATCGACAACGGGCGGATGGAGATGCGCGAGGACGATCAGCTCCGTGAGACGCTGTACTGCATCCGGTGTTCGGCG
TGTGCGAACTCCTGTGCGAACTTCCAGCACGTCGGCGGCCACGCCTTCGGTGGCGAGACGTACTCCGGCGGCATCGCCAC
CGGCTGGGAGGCCGGCGTCCACGGCGAGGACAGCGCCGCCGAGTTCAACGACCTCTGTACGGGTTGTAGTCGGTGTGTGA
ACCAGTGTCCGGTGAACATCGACATCCCGTGGATCAACACGGTCGTCCGAGACCGCATCAATCGCGGGAAGGACGGCGAC
CTCGACTTCCTCGTGGAGGGGCTCACCCCGGACGAGGAGCCTGGTGGGGTCGACCTCCAGAAACGGCTGTTCGGGAACTT
CGACACGCTGGCGAAACTCGGGTCGGCGTTCGCACCGCTCTCGAACTGGGCCGCACGGACCGGTCCCGCGCGCTCGCTGC
TGGAGCGAACTCTCGGCGTCGACAGCCGCCGCGAACTCCCGGAGTTCGAACGTGAATCACTCGTGGAGTGGTTCGAGAAG
CGGGGGCCACGCGTCGGTCGCGACGAGGCACGCCGACAGGTCGCGCTCTACCCCGACGCGTACACGAACTACGTGCGCAC
GGAGCGCGGGAAGGCTGCCGTCCGCGTCCTCGAGGCGCTCGACATCCGCGTCGACGTTCCGCCCGCAGGCGAGAGCGGGC
GCGCCCCGCTCTCACAGGGGATGGTGTCGACGGCCCAGTCCAACGCCAACGCCGTCTACGACGCGATCGCGCCCGCCATC
GCGGCAGGTCACGACGTCGTCGTCATCGAGCCGTCAGATCTCGCGATGTTCCACCGCGAGTACGAACGGCTCCTTCCGGA
AGACGACTACGCCGCGCTGCAGGAGCACAGCTACGAACTCATGGAGTACGTCTACGGCCTGCTAGAGAACGGGGCGGACA
TCGATGTACTCCCTGGCGGCGGCGACGAGCGGATCGCTTACCACAGCCACTGTCAGCAGCGGACGCTCGATCTCGAACCG
TACACGGTGGCGGTGCTCGAAGACTGCGGGTTCGACGTGACGACCTCGGACGTGGAGTGTTGTGGAATGGCTGGAAGCTT
CGGCTACAAGTCCGAGTACTACGAGCTCAGCGTGGACGTTGGCGAGACACTCGTCGATCAATTCACCACGGAAGACACCG
CGGACCGTACTGTCGTCGCCAGCGGGACGTCGTGTCTCGAGCAACTCGACGCACTCCTCACGCGCCGGCCCGCACATCCG
GTACGGCTACTCGATACACAGTAG

Upstream 100 bases:

>100_bases
CATCGCGACGGGGCCGAGCGCAACCGCAGACATGGGCGCGCTCGTGACGGGCGCTCACGGCCCGATGGATGTGACGGTCG
TACTTCTGGAGGGCAAGTAG

Downstream 100 bases:

>100_bases
TCCGGCCCGGATGAGAGGTCGCTATAGGGTGTTCCGGCGGCAGTAGTCTTCCCTTCCAGAGCTGTTCGGTCGGGGAGAGC
GGGATGATTAGTGTGCTGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 727; Mature: 726

Protein sequence:

>727_residues
MSADTRRQKAERIRHLLDTEGDAVHENTQVFNEGRYESTANLDDYDELKNEARAIKEDAIERLPELIDQVTEAVEANGGS
VYVADDAADANRYMEEVVDGRDVVKSKSMTSEEIEVNESLEARGGDVWETDLAEFVLQVADEAPSHIVAPAIHKSREEIA
TLFNEVFDPEEPLETAEELTRFAREYLGEKILDAEVGMTGANFVTADTGTLALVTSEGNARKCVQATDTHVAVAGVEKLV
PSVEDLQPFVELIGRSGTGQDITSYVSLFTPPSDSPTFGGNELESGDDREFHLVLIDNGRMEMREDDQLRETLYCIRCSA
CANSCANFQHVGGHAFGGETYSGGIATGWEAGVHGEDSAAEFNDLCTGCSRCVNQCPVNIDIPWINTVVRDRINRGKDGD
LDFLVEGLTPDEEPGGVDLQKRLFGNFDTLAKLGSAFAPLSNWAARTGPARSLLERTLGVDSRRELPEFERESLVEWFEK
RGPRVGRDEARRQVALYPDAYTNYVRTERGKAAVRVLEALDIRVDVPPAGESGRAPLSQGMVSTAQSNANAVYDAIAPAI
AAGHDVVVIEPSDLAMFHREYERLLPEDDYAALQEHSYELMEYVYGLLENGADIDVLPGGGDERIAYHSHCQQRTLDLEP
YTVAVLEDCGFDVTTSDVECCGMAGSFGYKSEYYELSVDVGETLVDQFTTEDTADRTVVASGTSCLEQLDALLTRRPAHP
VRLLDTQ

Sequences:

>Translated_727_residues
MSADTRRQKAERIRHLLDTEGDAVHENTQVFNEGRYESTANLDDYDELKNEARAIKEDAIERLPELIDQVTEAVEANGGS
VYVADDAADANRYMEEVVDGRDVVKSKSMTSEEIEVNESLEARGGDVWETDLAEFVLQVADEAPSHIVAPAIHKSREEIA
TLFNEVFDPEEPLETAEELTRFAREYLGEKILDAEVGMTGANFVTADTGTLALVTSEGNARKCVQATDTHVAVAGVEKLV
PSVEDLQPFVELIGRSGTGQDITSYVSLFTPPSDSPTFGGNELESGDDREFHLVLIDNGRMEMREDDQLRETLYCIRCSA
CANSCANFQHVGGHAFGGETYSGGIATGWEAGVHGEDSAAEFNDLCTGCSRCVNQCPVNIDIPWINTVVRDRINRGKDGD
LDFLVEGLTPDEEPGGVDLQKRLFGNFDTLAKLGSAFAPLSNWAARTGPARSLLERTLGVDSRRELPEFERESLVEWFEK
RGPRVGRDEARRQVALYPDAYTNYVRTERGKAAVRVLEALDIRVDVPPAGESGRAPLSQGMVSTAQSNANAVYDAIAPAI
AAGHDVVVIEPSDLAMFHREYERLLPEDDYAALQEHSYELMEYVYGLLENGADIDVLPGGGDERIAYHSHCQQRTLDLEP
YTVAVLEDCGFDVTTSDVECCGMAGSFGYKSEYYELSVDVGETLVDQFTTEDTADRTVVASGTSCLEQLDALLTRRPAHP
VRLLDTQ
>Mature_726_residues
SADTRRQKAERIRHLLDTEGDAVHENTQVFNEGRYESTANLDDYDELKNEARAIKEDAIERLPELIDQVTEAVEANGGSV
YVADDAADANRYMEEVVDGRDVVKSKSMTSEEIEVNESLEARGGDVWETDLAEFVLQVADEAPSHIVAPAIHKSREEIAT
LFNEVFDPEEPLETAEELTRFAREYLGEKILDAEVGMTGANFVTADTGTLALVTSEGNARKCVQATDTHVAVAGVEKLVP
SVEDLQPFVELIGRSGTGQDITSYVSLFTPPSDSPTFGGNELESGDDREFHLVLIDNGRMEMREDDQLRETLYCIRCSAC
ANSCANFQHVGGHAFGGETYSGGIATGWEAGVHGEDSAAEFNDLCTGCSRCVNQCPVNIDIPWINTVVRDRINRGKDGDL
DFLVEGLTPDEEPGGVDLQKRLFGNFDTLAKLGSAFAPLSNWAARTGPARSLLERTLGVDSRRELPEFERESLVEWFEKR
GPRVGRDEARRQVALYPDAYTNYVRTERGKAAVRVLEALDIRVDVPPAGESGRAPLSQGMVSTAQSNANAVYDAIAPAIA
AGHDVVVIEPSDLAMFHREYERLLPEDDYAALQEHSYELMEYVYGLLENGADIDVLPGGGDERIAYHSHCQQRTLDLEPY
TVAVLEDCGFDVTTSDVECCGMAGSFGYKSEYYELSVDVGETLVDQFTTEDTADRTVVASGTSCLEQLDALLTRRPAHPV
RLLDTQ

Specific function: Unknown

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1786498, Length=465, Percent_Identity=35.0537634408602, Blast_Score=266, Evalue=3e-72,
Organism=Escherichia coli, GI1788576, Length=413, Percent_Identity=23.9709443099274, Blast_Score=125, Evalue=7e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR003741
- InterPro:   IPR004452
- InterPro:   IPR002698
- InterPro:   IPR012285
- InterPro:   IPR009051 [H]

Pfam domain/function: PF02589 DUF162 [H]

EC number: NA

Molecular weight: Translated: 79846; Mature: 79715

Theoretical pI: Translated: 4.14; Mature: 4.14

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSADTRRQKAERIRHLLDTEGDAVHENTQVFNEGRYESTANLDDYDELKNEARAIKEDAI
CCCCHHHHHHHHHHHHHCCCCCCHHCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
ERLPELIDQVTEAVEANGGSVYVADDAADANRYMEEVVDGRDVVKSKSMTSEEIEVNESL
HHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCHHHHHHHCCCCCHHHHCCCCH
EARGGDVWETDLAEFVLQVADEAPSHIVAPAIHKSREEIATLFNEVFDPEEPLETAEELT
HCCCCCCHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
RFAREYLGEKILDAEVGMTGANFVTADTGTLALVTSEGNARKCVQATDTHVAVAGVEKLV
HHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEEEECCCCCHHHHHHCCCEEHHHHHHHHC
PSVEDLQPFVELIGRSGTGQDITSYVSLFTPPSDSPTFGGNELESGDDREFHLVLIDNGR
CCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCC
MEMREDDQLRETLYCIRCSACANSCANFQHVGGHAFGGETYSGGIATGWEAGVHGEDSAA
CCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
EFNDLCTGCSRCVNQCPVNIDIPWINTVVRDRINRGKDGDLDFLVEGLTPDEEPGGVDLQ
HHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHCCCCCCCHHHEEECCCCCCCCCCCCHH
KRLFGNFDTLAKLGSAFAPLSNWAARTGPARSLLERTLGVDSRRELPEFERESLVEWFEK
HHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHH
RGPRVGRDEARRQVALYPDAYTNYVRTERGKAAVRVLEALDIRVDVPPAGESGRAPLSQG
CCCCCCHHHHHCEEEECCHHHHHHHHHCCHHHHHHHHHHHCCEEECCCCCCCCCCCHHHH
MVSTAQSNANAVYDAIAPAIAAGHDVVVIEPSDLAMFHREYERLLPEDDYAALQEHSYEL
HHHHHHCCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH
MEYVYGLLENGADIDVLPGGGDERIAYHSHCQQRTLDLEPYTVAVLEDCGFDVTTSDVEC
HHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCEEEEEEHHCCCCCCCCCHHH
CGMAGSFGYKSEYYELSVDVGETLVDQFTTEDTADRTVVASGTSCLEQLDALLTRRPAHP
HCCCCCCCCCCCEEEEECCHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCC
VRLLDTQ
EEECCCC
>Mature Secondary Structure 
SADTRRQKAERIRHLLDTEGDAVHENTQVFNEGRYESTANLDDYDELKNEARAIKEDAI
CCCHHHHHHHHHHHHHCCCCCCHHCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
ERLPELIDQVTEAVEANGGSVYVADDAADANRYMEEVVDGRDVVKSKSMTSEEIEVNESL
HHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCHHHHHHHCCCCCHHHHCCCCH
EARGGDVWETDLAEFVLQVADEAPSHIVAPAIHKSREEIATLFNEVFDPEEPLETAEELT
HCCCCCCHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
RFAREYLGEKILDAEVGMTGANFVTADTGTLALVTSEGNARKCVQATDTHVAVAGVEKLV
HHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEEEECCCCCHHHHHHCCCEEHHHHHHHHC
PSVEDLQPFVELIGRSGTGQDITSYVSLFTPPSDSPTFGGNELESGDDREFHLVLIDNGR
CCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCC
MEMREDDQLRETLYCIRCSACANSCANFQHVGGHAFGGETYSGGIATGWEAGVHGEDSAA
CCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
EFNDLCTGCSRCVNQCPVNIDIPWINTVVRDRINRGKDGDLDFLVEGLTPDEEPGGVDLQ
HHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHCCCCCCCHHHEEECCCCCCCCCCCCHH
KRLFGNFDTLAKLGSAFAPLSNWAARTGPARSLLERTLGVDSRRELPEFERESLVEWFEK
HHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHH
RGPRVGRDEARRQVALYPDAYTNYVRTERGKAAVRVLEALDIRVDVPPAGESGRAPLSQG
CCCCCCHHHHHCEEEECCHHHHHHHHHCCHHHHHHHHHHHCCEEECCCCCCCCCCCHHHH
MVSTAQSNANAVYDAIAPAIAAGHDVVVIEPSDLAMFHREYERLLPEDDYAALQEHSYEL
HHHHHHCCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH
MEYVYGLLENGADIDVLPGGGDERIAYHSHCQQRTLDLEPYTVAVLEDCGFDVTTSDVEC
HHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCEEEEEEHHCCCCCCCCCHHH
CGMAGSFGYKSEYYELSVDVGETLVDQFTTEDTADRTVVASGTSCLEQLDALLTRRPAHP
HCCCCCCCCCCCEEEEECCHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCC
VRLLDTQ
EEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]