| Definition | Halobacterium sp. NRC-1 plasmid pNRC200, complete sequence. |
|---|---|
| Accession | NC_002608 |
| Length | 365,425 |
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The map label for this gene is zurM
Identifier: 16120185
GI number: 16120185
Start: 202141
End: 203145
Strand: Reverse
Name: zurM
Synonym: VNG6262G
Alternate gene names: 16120185
Gene position: 203145-202141 (Counterclockwise)
Preceding gene: 16120186
Following gene: 16120182
Centisome position: 55.59
GC content: 63.78
Gene sequence:
>1005_bases ATGACGGACGTGATCGTCCAGCCGGCAGTCATCGAACCGCTGCTCGGCCCGCTGTACTGGCTGCTTGGCGTCTGGTCGCA GCTCATGACCGGGGTTGCGCGTGCAACCGGCCTGGAGGTCCTCCAATACGGGTTCATGCACCGCGCGATCCTGGTTGGGC TCTGCATCGGCGTGATGGCCCCGCTCATCGGGACGTTCCTAGTCCACCGGCAACTCGCCCTCATAGGGGACGCCCTCGCC CACACTGGGTTCGCCGGCGTTGCCATCGGCCTGTTCTTGAACGCCGTCTTTGAGTTCGGGATCTCGCCGTACCTGACGGC GGTGATCGTGGCGATGGTCGCGGCGCTACTGATCGAGGTGATCTCGGAGACGACCGACGCGTACAACGACGTCTCGATGG CGATCGTGTTGTCCACTGGGTTCGCGCTCGGCACCACGCTCATCAGCATCAACGCTGGTGGGCTGGCCGTCGGCGTCAAT CAGTTCCTGTTCGGGAACCTCTCGACGGTCTCCACCGACAGCGCCGCCATCCTCCTGGTGTTGTTCACGATCATCATCGG CGTTGTCGGAGTGACCCGCAACCAACTGCTGTACGTGACCTTCGATGAGACCGCCGCTGCGGTTTCCGGGCTGTCCGTGA ACTGGTACAACCGCATCATGGTGATGCTGACCGCCATGGTCGTCGTCGGTGCCATGCAGATCATGGGCGTCATCCTCGTG GCGGCGATGCTCGTCGTCCCCGTGGCGGGAGCGTCACAGGTCGCTCGCAGTTTCAACGAATCACTGCTCGTGTCAGTCGT GCTCGCGGAAATCGCCGTGGTGTTGGGCATCGCCGTCTCCTACTACGGGGAAGCGACTGCCGGGGGAGTGATCGTGTTGC TCGCCGTTGGAGTCTACGTGCTCGCAGTCCTGGCGGGGAAGCTACAGACCGCCCTCACCGGCACTGAAACGCCGGAGATG GGGGCGATCTCCCCGAACTCGGACCCGACGACGACCGACGACTGA
Upstream 100 bases:
>100_bases ACCGAGAACTACATTTCGACGGCCCCACGGCGGAGTTCGTCGACAGCGACGCGCTCGCACGCGCGTTCGGCACCACGACC GCCGTGCTCGGTGACGACTG
Downstream 100 bases:
>100_bases GCCACTGCTACTCGCCGGCGACGAGACAGTCTCCGTCACGCTGTTCGCGTGACGGCAGTGCGGCACGCGACCGCCACGCC AACGGCGATCGCCGCACGCG
Product: ABC transporter permease
Products: Zn (II) [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MTDVIVQPAVIEPLLGPLYWLLGVWSQLMTGVARATGLEVLQYGFMHRAILVGLCIGVMAPLIGTFLVHRQLALIGDALA HTGFAGVAIGLFLNAVFEFGISPYLTAVIVAMVAALLIEVISETTDAYNDVSMAIVLSTGFALGTTLISINAGGLAVGVN QFLFGNLSTVSTDSAAILLVLFTIIIGVVGVTRNQLLYVTFDETAAAVSGLSVNWYNRIMVMLTAMVVVGAMQIMGVILV AAMLVVPVAGASQVARSFNESLLVSVVLAEIAVVLGIAVSYYGEATAGGVIVLLAVGVYVLAVLAGKLQTALTGTETPEM GAISPNSDPTTTDD
Sequences:
>Translated_334_residues MTDVIVQPAVIEPLLGPLYWLLGVWSQLMTGVARATGLEVLQYGFMHRAILVGLCIGVMAPLIGTFLVHRQLALIGDALA HTGFAGVAIGLFLNAVFEFGISPYLTAVIVAMVAALLIEVISETTDAYNDVSMAIVLSTGFALGTTLISINAGGLAVGVN QFLFGNLSTVSTDSAAILLVLFTIIIGVVGVTRNQLLYVTFDETAAAVSGLSVNWYNRIMVMLTAMVVVGAMQIMGVILV AAMLVVPVAGASQVARSFNESLLVSVVLAEIAVVLGIAVSYYGEATAGGVIVLLAVGVYVLAVLAGKLQTALTGTETPEM GAISPNSDPTTTDD >Mature_333_residues TDVIVQPAVIEPLLGPLYWLLGVWSQLMTGVARATGLEVLQYGFMHRAILVGLCIGVMAPLIGTFLVHRQLALIGDALAH TGFAGVAIGLFLNAVFEFGISPYLTAVIVAMVAALLIEVISETTDAYNDVSMAIVLSTGFALGTTLISINAGGLAVGVNQ FLFGNLSTVSTDSAAILLVLFTIIIGVVGVTRNQLLYVTFDETAAAVSGLSVNWYNRIMVMLTAMVVVGAMQIMGVILVA AMLVVPVAGASQVARSFNESLLVSVVLAEIAVVLGIAVSYYGEATAGGVIVLLAVGVYVLAVLAGKLQTALTGTETPEMG AISPNSDPTTTDD
Specific function: Part of an ATP-driven transport system TP_0034/TP_0035/TP_0036 for a metal [H]
COG id: COG1108
COG function: function code P; ABC-type Mn2+/Zn2+ transport systems, permease components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ABC-3 integral membrane protein family [H]
Homologues:
Organism=Escherichia coli, GI1788166, Length=257, Percent_Identity=24.124513618677, Blast_Score=81, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001626 [H]
Pfam domain/function: PF00950 ABC-3 [H]
EC number: NA
Molecular weight: Translated: 34564; Mature: 34433
Theoretical pI: Translated: 4.03; Mature: 4.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDVIVQPAVIEPLLGPLYWLLGVWSQLMTGVARATGLEVLQYGFMHRAILVGLCIGVMA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLIGTFLVHRQLALIGDALAHTGFAGVAIGLFLNAVFEFGISPYLTAVIVAMVAALLIEV HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH ISETTDAYNDVSMAIVLSTGFALGTTLISINAGGLAVGVNQFLFGNLSTVSTDSAAILLV HHHHHHHHCHHHHHHHHHCCHHHHHHHEEECCCCHHHHHHHHHHCCCCCCCCCHHHHHHH LFTIIIGVVGVTRNQLLYVTFDETAAAVSGLSVNWYNRIMVMLTAMVVVGAMQIMGVILV HHHHHHHHHHCCCCCEEEEEECHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAMLVVPVAGASQVARSFNESLLVSVVLAEIAVVLGIAVSYYGEATAGGVIVLLAVGVYV HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH LAVLAGKLQTALTGTETPEMGAISPNSDPTTTDD HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TDVIVQPAVIEPLLGPLYWLLGVWSQLMTGVARATGLEVLQYGFMHRAILVGLCIGVMA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLIGTFLVHRQLALIGDALAHTGFAGVAIGLFLNAVFEFGISPYLTAVIVAMVAALLIEV HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH ISETTDAYNDVSMAIVLSTGFALGTTLISINAGGLAVGVNQFLFGNLSTVSTDSAAILLV HHHHHHHHCHHHHHHHHHCCHHHHHHHEEECCCCHHHHHHHHHHCCCCCCCCCHHHHHHH LFTIIIGVVGVTRNQLLYVTFDETAAAVSGLSVNWYNRIMVMLTAMVVVGAMQIMGVILV HHHHHHHHHHCCCCCEEEEEECHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAMLVVPVAGASQVARSFNESLLVSVVLAEIAVVLGIAVSYYGEATAGGVIVLLAVGVYV HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH LAVLAGKLQTALTGTETPEMGAISPNSDPTTTDD HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Zn (II) [Periplasm]; H2O; ATP [C]
Specific reaction: Zn (II) [Periplasm] + H2O + ATP = Zn (II) [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9665876 [H]