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The map label for this gene is trkA4

Identifier: 16120176

GI number: 16120176

Start: 194523

End: 195221

Strand: Direct

Name: trkA4

Synonym: VNG6247G

Alternate gene names: 16120176

Gene position: 194523-195221 (Clockwise)

Preceding gene: 16120175

Following gene: 16120177

Centisome position: 53.23

GC content: 68.38

Gene sequence:

>699_bases
ATGCAGGTCATCATCGTCGGAGCGGGGACGGTCGGAGCGCCGCTGGTGGACGTTGCGACTGGATCCGGGAACGAGGTCGT
CGTCGTCGAGCAGGACGGGGGGCGCGCGAACGAGATCGCCGACGCCTACGACTGTGCGGTGTTGCACGCCGACGCCACGG
ACGAGTCGACGATCCAGGACGCAGGGGCCGACCGCGCCGACGCCCTGATCACCACCACTGGGCGGGATCCGACGAATCTC
TTCGTGTGTCTGCTCGGGGCCGAACACGACATCCCCACGGTTGTGTCGCTGCTACAGCGCCCGGCGCACCGCCACCTGTT
TGCGGAGTTGGGCGTCTACACGGTTGCCGGGCTGCACGATCTCGCCGCCGAATCACTGTACCGGGTTGCCAGACAGCCCG
CCGTATCGGAGTCCATGCCGGTTGCTGGTGACGCGGCCGTGTTCCGGATCACGGTGGGCGCTGACGCGCCGATCGCGGAC
ACGATGCTCGTGGATGCGCGGTCGACGGGGGTGTTGCCCGACGACGTCCTGGTTGTCGCGGTCCGGACGGGCGACGGGGA
GGCGGAGATCGCGCGCTCGGAGACGACGATCACCCCCGGTGACGAAGTAACGGTGTATTCGAGCCGTGGCACCACGGCGG
ACGTGACAGCTGTGTTCAGCACTGACGTTCGCGAGGACGGCGCCCGCGGGCGGTTCTGA

Upstream 100 bases:

>100_bases
GGAGCTGTGAGGCGGGGCGGGAGCCGGCACCCCCACGCCGTGGCGGTCAGTGGGTGAACAACCGAAGCGAGGATTTATCC
GCGTTGTGAACGCGACAGTG

Downstream 100 bases:

>100_bases
GTGGATGGCGGGCGTGGTTGCGTCCGCGATCGACGCATCCATACGGACGGACTCGTGAGAACAGCCCAGCACGGGGAGAC
GGATTTCATTCATGGCTTCG

Product: TRK potassium uptake system protein

Products: NA

Alternate protein names: K(+)-uptake protein trkA homolog [H]

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MQVIIVGAGTVGAPLVDVATGSGNEVVVVEQDGGRANEIADAYDCAVLHADATDESTIQDAGADRADALITTTGRDPTNL
FVCLLGAEHDIPTVVSLLQRPAHRHLFAELGVYTVAGLHDLAAESLYRVARQPAVSESMPVAGDAAVFRITVGADAPIAD
TMLVDARSTGVLPDDVLVVAVRTGDGEAEIARSETTITPGDEVTVYSSRGTTADVTAVFSTDVREDGARGRF

Sequences:

>Translated_232_residues
MQVIIVGAGTVGAPLVDVATGSGNEVVVVEQDGGRANEIADAYDCAVLHADATDESTIQDAGADRADALITTTGRDPTNL
FVCLLGAEHDIPTVVSLLQRPAHRHLFAELGVYTVAGLHDLAAESLYRVARQPAVSESMPVAGDAAVFRITVGADAPIAD
TMLVDARSTGVLPDDVLVVAVRTGDGEAEIARSETTITPGDEVTVYSSRGTTADVTAVFSTDVREDGARGRF
>Mature_232_residues
MQVIIVGAGTVGAPLVDVATGSGNEVVVVEQDGGRANEIADAYDCAVLHADATDESTIQDAGADRADALITTTGRDPTNL
FVCLLGAEHDIPTVVSLLQRPAHRHLFAELGVYTVAGLHDLAAESLYRVARQPAVSESMPVAGDAAVFRITVGADAPIAD
TMLVDARSTGVLPDDVLVVAVRTGDGEAEIARSETTITPGDEVTVYSSRGTTADVTAVFSTDVREDGARGRF

Specific function: Part of a potassium transport system [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Peripherally Bound To The Inner Side Of The Inner Membrane Via The Trkg And Trkh Proteins [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 RCK N-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1789685, Length=83, Percent_Identity=36.144578313253, Blast_Score=65, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006036
- InterPro:   IPR016040
- InterPro:   IPR006037
- InterPro:   IPR003148 [H]

Pfam domain/function: PF02080 TrkA_C; PF02254 TrkA_N [H]

EC number: NA

Molecular weight: Translated: 24030; Mature: 24030

Theoretical pI: Translated: 4.08; Mature: 4.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVIIVGAGTVGAPLVDVATGSGNEVVVVEQDGGRANEIADAYDCAVLHADATDESTIQD
CEEEEEECCCCCCCEEEEECCCCCEEEEEECCCCCHHHHHCHHEEEEEECCCCCCHHHHH
AGADRADALITTTGRDPTNLFVCLLGAEHDIPTVVSLLQRPAHRHLFAELGVYTVAGLHD
CCCCCCCEEEEECCCCCCEEEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
LAAESLYRVARQPAVSESMPVAGDAAVFRITVGADAPIADTMLVDARSTGVLPDDVLVVA
HHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCEEEEE
VRTGDGEAEIARSETTITPGDEVTVYSSRGTTADVTAVFSTDVREDGARGRF
EEECCCCEEEECCCCEECCCCCEEEEECCCCEEEEEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MQVIIVGAGTVGAPLVDVATGSGNEVVVVEQDGGRANEIADAYDCAVLHADATDESTIQD
CEEEEEECCCCCCCEEEEECCCCCEEEEEECCCCCHHHHHCHHEEEEEECCCCCCHHHHH
AGADRADALITTTGRDPTNLFVCLLGAEHDIPTVVSLLQRPAHRHLFAELGVYTVAGLHD
CCCCCCCEEEEECCCCCCEEEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
LAAESLYRVARQPAVSESMPVAGDAAVFRITVGADAPIADTMLVDARSTGVLPDDVLVVA
HHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCEEEEE
VRTGDGEAEIARSETTITPGDEVTVYSSRGTTADVTAVFSTDVREDGARGRF
EEECCCCEEEECCCCEECCCCCEEEEECCCCEEEEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]