Click here to switch to the map view.

The map label for this gene is gvpN2

Identifier: 16120174

GI number: 16120174

Start: 193040

End: 194074

Strand: Direct

Name: gvpN2

Synonym: VNG6244G

Alternate gene names: 16120174

Gene position: 193040-194074 (Clockwise)

Preceding gene: 16120173

Following gene: 16120175

Centisome position: 52.83

GC content: 67.05

Gene sequence:

>1035_bases
ATGACCGACACCTCACGGAACCGCAAGGTCAGAGGGTCGAAAATCCGGTCCTCGCGCAGCGATAAGCGTCAGTCACGGGG
CAGCGAGGACAAGGAACTCAAGCGGCTCGCGGACGCGCGGGACACCGATTCCGAGCAGGCAGGCGACCGCGTCGGCGACG
CGTTCATTCCCGACGAGCAGTCGTTCATCGAGACCGACGCGGTGGCGCGGGTCACCGACCGCATGCGGCGGTGGCTCAGC
GTCGACCGACCGGTTCACTTGATCGGACCGACTGGCTGCGGGAAGACCGCAGTGGCGATGCACGTCGCTCGGACGCGTGA
CCGGCCGGTGGTCTGGGTCAACGGGGACGCCGACCTCACGACGAGTGATCTGGTCGGGGAGTACGCCGAGACCGAGCGCA
TCTCGGAGCACGACCAGTTCATCCACAACGTCGTCAAGCGCAAGGACATCGTCCGTGACCGCTGGGTTGACAACCCGCTG
ACGCTGGCCGTCCAGGAGGGCGCGACGCTCGTGTACAACGAGTTCTCGCGCACCAAACCAGTGGCCAACAACGTGTTGCT
GTCGGTGTTCGAGGAGGGCGTCCTCGAGCTCCCCGGCAAACGCGGGGCGTCGCGGTACGTCGACGTGCATCCGGCGTTCC
GAACGATCCTGACCTCGAACTCCGTCGAGTACGCCGGCGTTCACGAGCCACAGGACGCGTTGCTCGACCGGCTGGTCGGG
CTGCACATGGACTTCTACGATGCCGAGACCGAGACCGCCATCGTTCGTGCGCACGTCGAGGCGGCCGACGTGCCGGTCGC
GGCCATCGTGGGGATGATGCGCGAACTCCGGGAGCGCCTGGAGATCACCGTCGGCACCCGCGCCGCGATCATGGCGGCCG
AAGGGCTGACTGCGGCCGACGACCCGGACGCCGACACCGTCGTGGACGTGTGTACGGACGTGCTGGCGTCGAAGGTGAGC
CAGCGAAGCGACGTCGAGGCGCTCCGGGACGTGATCGAGGAGACGCTGGCTGACCGCGGAGTAACGCTTTCGTGA

Upstream 100 bases:

>100_bases
AGGCGATCACTGAGCCCCACCTCCAGACCCATGAGATGACCATCGACGGCTACCGCGACGAGTACGGCGAGGACGTTCCG
CTCCGGCCGGATGATCACGC

Downstream 100 bases:

>100_bases
TGGCACCCGACTACGCACACGCATGGACGATCCAGTAGCCGACCAACCGGACGGCACGGATGAGACCCCCGACGGCGACA
CAGCGGGATCGTCGCCGATC

Product: GvpN protein, cluster B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 343

Protein sequence:

>344_residues
MTDTSRNRKVRGSKIRSSRSDKRQSRGSEDKELKRLADARDTDSEQAGDRVGDAFIPDEQSFIETDAVARVTDRMRRWLS
VDRPVHLIGPTGCGKTAVAMHVARTRDRPVVWVNGDADLTTSDLVGEYAETERISEHDQFIHNVVKRKDIVRDRWVDNPL
TLAVQEGATLVYNEFSRTKPVANNVLLSVFEEGVLELPGKRGASRYVDVHPAFRTILTSNSVEYAGVHEPQDALLDRLVG
LHMDFYDAETETAIVRAHVEAADVPVAAIVGMMRELRERLEITVGTRAAIMAAEGLTAADDPDADTVVDVCTDVLASKVS
QRSDVEALRDVIEETLADRGVTLS

Sequences:

>Translated_344_residues
MTDTSRNRKVRGSKIRSSRSDKRQSRGSEDKELKRLADARDTDSEQAGDRVGDAFIPDEQSFIETDAVARVTDRMRRWLS
VDRPVHLIGPTGCGKTAVAMHVARTRDRPVVWVNGDADLTTSDLVGEYAETERISEHDQFIHNVVKRKDIVRDRWVDNPL
TLAVQEGATLVYNEFSRTKPVANNVLLSVFEEGVLELPGKRGASRYVDVHPAFRTILTSNSVEYAGVHEPQDALLDRLVG
LHMDFYDAETETAIVRAHVEAADVPVAAIVGMMRELRERLEITVGTRAAIMAAEGLTAADDPDADTVVDVCTDVLASKVS
QRSDVEALRDVIEETLADRGVTLS
>Mature_343_residues
TDTSRNRKVRGSKIRSSRSDKRQSRGSEDKELKRLADARDTDSEQAGDRVGDAFIPDEQSFIETDAVARVTDRMRRWLSV
DRPVHLIGPTGCGKTAVAMHVARTRDRPVVWVNGDADLTTSDLVGEYAETERISEHDQFIHNVVKRKDIVRDRWVDNPLT
LAVQEGATLVYNEFSRTKPVANNVLLSVFEEGVLELPGKRGASRYVDVHPAFRTILTSNSVEYAGVHEPQDALLDRLVGL
HMDFYDAETETAIVRAHVEAADVPVAAIVGMMRELRERLEITVGTRAAIMAAEGLTAADDPDADTVVDVCTDVLASKVSQ
RSDVEALRDVIEETLADRGVTLS

Specific function: Unknown

COG id: COG0714

COG function: function code R; MoxR-like ATPases

Gene ontology:

Cell location: Vacuole, gas vesicle

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbbQ/NirQ/NorQ/GpvN family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GVPN2_HALSA (Q9HHS9)

Other databases:

- EMBL:   X64730
- EMBL:   X94688
- EMBL:   AE004438
- RefSeq:   NP_395762.1
- ProteinModelPortal:   Q9HHS9
- GeneID:   1449145
- GenomeReviews:   AE004438_GR
- KEGG:   hal:VNG6244G
- NMPDR:   fig|64091.1.peg.2446
- HOGENOM:   HBG457036
- OMA:   HMAWRLK
- ProtClustDB:   CLSK2746193
- BioCyc:   HSP64091:VNG6244G-MONOMER
- GO:   GO:0005773
- InterPro:   IPR003593
- InterPro:   IPR011704
- InterPro:   IPR013462
- SMART:   SM00382
- TIGRFAMs:   TIGR02640

Pfam domain/function: PF07728 AAA_5

EC number: NA

Molecular weight: Translated: 38077; Mature: 37946

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDTSRNRKVRGSKIRSSRSDKRQSRGSEDKELKRLADARDTDSEQAGDRVGDAFIPDEQ
CCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCH
SFIETDAVARVTDRMRRWLSVDRPVHLIGPTGCGKTAVAMHVARTRDRPVVWVNGDADLT
HHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHCCCCCEEEECCCCCCC
TSDLVGEYAETERISEHDQFIHNVVKRKDIVRDRWVDNPLTLAVQEGATLVYNEFSRTKP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEHHHHHCCC
VANNVLLSVFEEGVLELPGKRGASRYVDVHPAFRTILTSNSVEYAGVHEPQDALLDRLVG
HHHHHHHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
LHMDFYDAETETAIVRAHVEAADVPVAAIVGMMRELRERLEITVGTRAAIMAAEGLTAAD
HHCHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHECCCCHHHHHHHCCCCCCC
DPDADTVVDVCTDVLASKVSQRSDVEALRDVIEETLADRGVTLS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TDTSRNRKVRGSKIRSSRSDKRQSRGSEDKELKRLADARDTDSEQAGDRVGDAFIPDEQ
CCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCH
SFIETDAVARVTDRMRRWLSVDRPVHLIGPTGCGKTAVAMHVARTRDRPVVWVNGDADLT
HHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHCCCCCEEEECCCCCCC
TSDLVGEYAETERISEHDQFIHNVVKRKDIVRDRWVDNPLTLAVQEGATLVYNEFSRTKP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEHHHHHCCC
VANNVLLSVFEEGVLELPGKRGASRYVDVHPAFRTILTSNSVEYAGVHEPQDALLDRLVG
HHHHHHHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
LHMDFYDAETETAIVRAHVEAADVPVAAIVGMMRELRERLEITVGTRAAIMAAEGLTAAD
HHCHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHECCCCHHHHHHHCCCCCCC
DPDADTVVDVCTDVLASKVSQRSDVEALRDVIEETLADRGVTLS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1404376; 8763925; 11016950