| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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Identifier: 15836048
GI number: 15836048
Start: 598112
End: 598951
Strand: Reverse
Name: Not Available
Synonym: CPj0517
Alternate gene names: NA
Gene position: 598951-598112 (Counterclockwise)
Preceding gene: 15836049
Following gene: 15836047
Centisome position: 48.83
GC content: 45.12
Gene sequence:
>840_bases ATGTCATCACTACTGAGCTGCGGAAGAATAGAGCCGACTCGGGTTACCTGTAGCTTAAAGACGTATCTTGAGGATACGAG TCAGAATCAGTTGAGCACACGTCTAGTTCGGGCAAGTGTCATCTTTTTATGCGCATTGTTGATCATTTTGGTTTGTGTGG CCCTCTCTAGTTTGATTCCAAGCATTATGGCCTTGGCGACCTCTTTTACGGTAATGGGGTTAATTCTTTTTGTGATGTCA CTTCTTGGTGACGTTGCAATTATAAGTTATCTTACTTATAGCACTGTTACGAGTTACCGGCAAAATAAGAGAGCTTTTGA GATTCACAAGCCCGCTCGCTCCGTTTACTACGAGGGGGTCCGCCATTGGGATTTAGGACGATCATCTTTAGGCACAGGCG AGATTCCTATAGTAAGGACGTTATTCTCTCCATTTCAGAACCATGGTCTTAACCATGCCTTAGCTGCTAAAATTTTCCTA TTTATGGAGCATTTCAGCCCTGAGCCACCGAACGAGCCTTTGGTGGATTGGGCCTGTTTGATTCGGGATTTTAGGCCTCA CGTCAGTTCTTTGTGCTTTGTTATTGAAAAACAAGGGTCATCGCTGAGGACTAAGGAAGGCAATACGATTTGTGAGGCTT TCCGCTCTGATTACGACGCCCATTTTGCTATGGTAGATTGCTACCGGTTGATCCACTCTAAGTTGATTATAGAGAAAATG GGATTGAAGAATATCGATATCATTCCGAGTGTCATGGTTCGTGAAGATTATCCTAGCCGTCCTGGGGAGGGCTATCGCGA AGGCCTATTACGTATGTATGGTGGCAAGGGGGCTCTGTGA
Upstream 100 bases:
>100_bases GTTAAAATTTTAACAATAGCTATTTATTATTAGTCATTTTTTTAATTAAAAAACTGTTAAAATTTTTAAAGCTAATTTAA GAAACAGTGAATAGTTCATC
Downstream 100 bases:
>100_bases CTTCCCTACTTTAGTTCCTAATGAGCGCTTGCCTATAGGGCCTTTCTTTGTCCCGCAGCACACTTCCGGTGCGAAGGGTA AGGAGTTTGCTAAAAGGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MSSLLSCGRIEPTRVTCSLKTYLEDTSQNQLSTRLVRASVIFLCALLIILVCVALSSLIPSIMALATSFTVMGLILFVMS LLGDVAIISYLTYSTVTSYRQNKRAFEIHKPARSVYYEGVRHWDLGRSSLGTGEIPIVRTLFSPFQNHGLNHALAAKIFL FMEHFSPEPPNEPLVDWACLIRDFRPHVSSLCFVIEKQGSSLRTKEGNTICEAFRSDYDAHFAMVDCYRLIHSKLIIEKM GLKNIDIIPSVMVREDYPSRPGEGYREGLLRMYGGKGAL
Sequences:
>Translated_279_residues MSSLLSCGRIEPTRVTCSLKTYLEDTSQNQLSTRLVRASVIFLCALLIILVCVALSSLIPSIMALATSFTVMGLILFVMS LLGDVAIISYLTYSTVTSYRQNKRAFEIHKPARSVYYEGVRHWDLGRSSLGTGEIPIVRTLFSPFQNHGLNHALAAKIFL FMEHFSPEPPNEPLVDWACLIRDFRPHVSSLCFVIEKQGSSLRTKEGNTICEAFRSDYDAHFAMVDCYRLIHSKLIIEKM GLKNIDIIPSVMVREDYPSRPGEGYREGLLRMYGGKGAL >Mature_278_residues SSLLSCGRIEPTRVTCSLKTYLEDTSQNQLSTRLVRASVIFLCALLIILVCVALSSLIPSIMALATSFTVMGLILFVMSL LGDVAIISYLTYSTVTSYRQNKRAFEIHKPARSVYYEGVRHWDLGRSSLGTGEIPIVRTLFSPFQNHGLNHALAAKIFLF MEHFSPEPPNEPLVDWACLIRDFRPHVSSLCFVIEKQGSSLRTKEGNTICEAFRSDYDAHFAMVDCYRLIHSKLIIEKMG LKNIDIIPSVMVREDYPSRPGEGYREGLLRMYGGKGAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31323; Mature: 31192
Theoretical pI: Translated: 8.39; Mature: 8.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLLSCGRIEPTRVTCSLKTYLEDTSQNQLSTRLVRASVIFLCALLIILVCVALSSLIP CCCCCCCCCCCCCEEEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SIMALATSFTVMGLILFVMSLLGDVAIISYLTYSTVTSYRQNKRAFEIHKPARSVYYEGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH RHWDLGRSSLGTGEIPIVRTLFSPFQNHGLNHALAAKIFLFMEHFSPEPPNEPLVDWACL HHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHH IRDFRPHVSSLCFVIEKQGSSLRTKEGNTICEAFRSDYDAHFAMVDCYRLIHSKLIIEKM HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH GLKNIDIIPSVMVREDYPSRPGEGYREGLLRMYGGKGAL CCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHCCCCCC >Mature Secondary Structure SSLLSCGRIEPTRVTCSLKTYLEDTSQNQLSTRLVRASVIFLCALLIILVCVALSSLIP CCCCCCCCCCCCEEEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SIMALATSFTVMGLILFVMSLLGDVAIISYLTYSTVTSYRQNKRAFEIHKPARSVYYEGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH RHWDLGRSSLGTGEIPIVRTLFSPFQNHGLNHALAAKIFLFMEHFSPEPPNEPLVDWACL HHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHH IRDFRPHVSSLCFVIEKQGSSLRTKEGNTICEAFRSDYDAHFAMVDCYRLIHSKLIIEKM HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH GLKNIDIIPSVMVREDYPSRPGEGYREGLLRMYGGKGAL CCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA