| Definition | Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome. |
|---|---|
| Accession | NC_002162 |
| Length | 751,719 |
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Identifier: 13357732
GI number: 13357732
Start: 214080
End: 214955
Strand: Reverse
Name: Not Available
Synonym: UU174
Alternate gene names: 13357732
Gene position: 214955-214080 (Counterclockwise)
Preceding gene: 13357733
Following gene: 13357731
Centisome position: 28.6
GC content: 30.14
Gene sequence:
>876_bases ATGGGAAAAAACAACAAATATTTAATTGCTTGTGATCTAGATGGAACACTTTTAAATAATGATAGTGATATATCAGAAAA AACAATTGAGGGAATTAAAAAAATCATCAATCAAGGCCATATTTTCTGTATTGTAACAGGTCGTCCCTTACGTGGATCAA TCCATATTTATGAAAAATTAGGATTAACAACTTTAATGGCTAATTATAATGGCTCTTATATTTCAAACCCTTCCGATAAA AAATTCGCGCCAATTAATATGACATTTAGTAAAGATATTGTAAGCGCAATTTTAAAAAATCGATTTATTGCTAAAAATAT TGTTAATGCTGTTGTTGAAGCTGATAATGTTGCTACCATTTTAAACAGTAATATGGATTTAAATATTTGAAAATCATTTA TTGATATATTTCACGTGCCCATTCGTGATATGAATGAAAAAAATAAATTGACTAAGGAAAATGATATTAACAACCTTATT AGAGATGCTAATGCCCTTTTATTAAATGTCAACGATAAAGCTTTATTTGATTCTATGGTTTATCATATTAAACAAATTGC TCCCACTTTAGCGGTTCGTAGCTGATCAGCGAGGGTTGATGACCAATTTGAAGTTATTGAAATTAATTCATCATTTGCTG ATAAAGCAATGGCTATGCGCTATTTATCCTCATATTATGGAATTCCATTAGATCGTTGTATAGCTTTCGGCGATGGTGAA AATGATTTGACAATGCTAAACCATGCTGGATATGGCTTTGCCATGAAAAATGGTACACGTCCCGCTAAATTACTAGCACG TCACATTACTAAACACACAAACGTAGAAAATGGTGTTGTTTGAGAATTAGAATATGTTTTAAATGAAAATAAATAA
Upstream 100 bases:
>100_bases AATAGTTGCGAGCGTGCTAACGATATTGCTTATCAAAATGTACAACTAGTTTTAAAACATATGCAACTAAAATAATAGTA TATAATGAGGTAAAAAATTA
Downstream 100 bases:
>100_bases AGTTTTTTTAAATAATGTTCGTTTATTGAACATTATTTTTTTATATATAATTAATGTTATAAAGTGAGGTTATCAATGCG CACAGGGAAATACATTACTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 291; Mature: 290
Protein sequence:
>291_residues MGKNNKYLIACDLDGTLLNNDSDISEKTIEGIKKIINQGHIFCIVTGRPLRGSIHIYEKLGLTTLMANYNGSYISNPSDK KFAPINMTFSKDIVSAILKNRFIAKNIVNAVVEADNVATILNSNMDLNIWKSFIDIFHVPIRDMNEKNKLTKENDINNLI RDANALLLNVNDKALFDSMVYHIKQIAPTLAVRSWSARVDDQFEVIEINSSFADKAMAMRYLSSYYGIPLDRCIAFGDGE NDLTMLNHAGYGFAMKNGTRPAKLLARHITKHTNVENGVVWELEYVLNENK
Sequences:
>Translated_291_residues MGKNNKYLIACDLDGTLLNNDSDISEKTIEGIKKIINQGHIFCIVTGRPLRGSIHIYEKLGLTTLMANYNGSYISNPSDK KFAPINMTFSKDIVSAILKNRFIAKNIVNAVVEADNVATILNSNMDLNI*KSFIDIFHVPIRDMNEKNKLTKENDINNLI RDANALLLNVNDKALFDSMVYHIKQIAPTLAVRS*SARVDDQFEVIEINSSFADKAMAMRYLSSYYGIPLDRCIAFGDGE NDLTMLNHAGYGFAMKNGTRPAKLLARHITKHTNVENGVV*ELEYVLNENK >Mature_290_residues GKNNKYLIACDLDGTLLNNDSDISEKTIEGIKKIINQGHIFCIVTGRPLRGSIHIYEKLGLTTLMANYNGSYISNPSDKK FAPINMTFSKDIVSAILKNRFIAKNIVNAVVEADNVATILNSNMDLNI*KSFIDIFHVPIRDMNEKNKLTKENDINNLIR DANALLLNVNDKALFDSMVYHIKQIAPTLAVRS*SARVDDQFEVIEINSSFADKAMAMRYLSSYYGIPLDRCIAFGDGEN DLTMLNHAGYGFAMKNGTRPAKLLARHITKHTNVENGVV*ELEYVLNENK
Specific function: Unknown
COG id: COG0561
COG function: function code R; Predicted hydrolases of the HAD superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]
Homologues:
Organism=Escherichia coli, GI2367265, Length=295, Percent_Identity=28.4745762711864, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR013200 - InterPro: IPR006379 - InterPro: IPR000150 [H]
Pfam domain/function: PF08282 Hydrolase_3 [H]
EC number: NA
Molecular weight: Translated: 32167; Mature: 32036
Theoretical pI: Translated: 7.62; Mature: 7.62
Prosite motif: PS01228 COF_1 ; PS01229 COF_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKNNKYLIACDLDGTLLNNDSDISEKTIEGIKKIINQGHIFCIVTGRPLRGSIHIYEKL CCCCCCEEEEEECCCEEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEHHHH GLTTLMANYNGSYISNPSDKKFAPINMTFSKDIVSAILKNRFIAKNIVNAVVEADNVATI CCEEEEECCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE LNSNMDLNIKSFIDIFHVPIRDMNEKNKLTKENDINNLIRDANALLLNVNDKALFDSMVY CCCCCCCCHHHHHHHHHCCCCCCCCHHCCCCHHHHHHHHHCCCEEEEECCHHHHHHHHHH HIKQIAPTLAVRSSARVDDQFEVIEINSSFADKAMAMRYLSSYYGIPLDRCIAFGDGEND HHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCHHHEEEECCCCCC LTMLNHAGYGFAMKNGTRPAKLLARHITKHTNVENGVVELEYVLNENK EEEEECCCCCEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCC >Mature Secondary Structure GKNNKYLIACDLDGTLLNNDSDISEKTIEGIKKIINQGHIFCIVTGRPLRGSIHIYEKL CCCCCEEEEEECCCEEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEHHHH GLTTLMANYNGSYISNPSDKKFAPINMTFSKDIVSAILKNRFIAKNIVNAVVEADNVATI CCEEEEECCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE LNSNMDLNIKSFIDIFHVPIRDMNEKNKLTKENDINNLIRDANALLLNVNDKALFDSMVY CCCCCCCCHHHHHHHHHCCCCCCCCHHCCCCHHHHHHHHHCCCEEEEECCHHHHHHHHHH HIKQIAPTLAVRSSARVDDQFEVIEINSSFADKAMAMRYLSSYYGIPLDRCIAFGDGEND HHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCHHHEEEECCCCCC LTMLNHAGYGFAMKNGTRPAKLLARHITKHTNVENGVVELEYVLNENK EEEEECCCCCEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9353931; 9025291; 9384377 [H]