Definition Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome.
Accession NC_002162
Length 751,719

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Identifier: 13357731

GI number: 13357731

Start: 211932

End: 214004

Strand: Reverse

Name: Not Available

Synonym: UU173

Alternate gene names: NA

Gene position: 214004-211932 (Counterclockwise)

Preceding gene: 13357732

Following gene: 13357729

Centisome position: 28.47

GC content: 24.17

Gene sequence:

>2073_bases
ATGCGCACAGGGAAATACATTACTAAATATGATTACATTGGTTATTATACAAAGCAAAAAGCAATGTGGTTTTTCACTAA
TGCTGAGATTAAAGCTAAAATCGACTTATTGTTAAAAAATGTTAGTTCTTATGATTTTGAGGATTTAGATGATGAAGAAG
AACATGATTATGAAATTGATGCATATGAAATTTATAAGGAACAAACTGATTTTCTTTCACAATTAGAAATTAATAAAAAT
ATAGATGTGGACAATCCTAAAATTGCTGAAGGTATTTTATTAGATAAAGCATCACAAGAAGATATTAAAAAAACTTATCA
TTACATTAAGAAAATTATTAATTTCGAAACTGATCCTTTATTTAAAAACAAATCATTAGAAGAGCTTGCTAATTTAACTT
TAGAATTAATTGATAAAAATGATAAAATCATTTTTTTTCAACCTGTTTTTATTAATGATAAATTAATTACTAAACCCGAT
TGTTTTATCAAAAAGAACGATGAATTTATTGTTATCGAAACAAAAGGGACAAGTTCAATTAAAAAACACCATATTTTAGA
TGTATTTTACCAAGCACAAGTTATCTCAAAACACCCTTATTTTATAAATAAATGTATAAGTTATCAAATGTGCATTGTTG
ATTATGTTAAATTAAAAAAAAATCAAGTAAATTTTACAATTTCTCCTTATTATAATTATCAAAAAAGCGTAGTTTTATCT
TTACCACCAAGTGCTGCAAATCAATTTAATAAATTTGAAATTAATGAATTAAAACGTAAACGTAAGCGTGGAGAAGCAAT
TTATTTAAAAAAAGACGAAAATAAAAAATATTATGAAGATATTGATGCTTATGATCATTGTAAAGGTATTTTAATAGATG
ATTTAATCGATGGAACCTATAGTAGCATAAATGATTATAAGGAAGCCAAAAAAATTTATGATTACAAAACAGAAGATTTA
AAAGATGATGTACGTTTTAATAAAACCATGGATGAATTAATTAAAGGCATTGAAAAATTACACAATGATTTTGATGAAGT
AATCAGCGAATTATTAGTTCATAAACAAAATTTATTAGCTTTGCCTATCGAACAAAGAATTCCTAACTATTTTATACCAT
CATATAATGATAAGGGTGACTATAAGGATAATGATTTTTGATTAGAATTAAGAAATTTATACGCATATAGCGGATATGAT
GTTATTAAATATAGTGGAAAAATTTTAACAATTAAAAAATTTGGTTTAGATAATGTTACTAAAGATATATTAGGGATTGA
TATTTTAAAAACATATGCTAATCAAACCTTTTTTAATTTATATAAAAATAATCAAATAAAGATCTATCAAGCTGCTGTTG
ATTTATTTGCTAAATTGAAATCAAAAAAGGTTTATTTTGATTTTGAATCAATTAATTCAGCAATTCGCGCTGTTGATAAT
TCGTTTCCTTTTACCCAAACTGTTACACAAAATTCTATTATTATTGATGATGGAAGTTGTGATATTAAAAATTTAAAATG
CACTAATATGATTATTGATCCACGTGAAATTAATAATGAATGGTTTAAAGCAATTATTGATAAAATTCACCAGGGATTAG
AATATTCATATATTGTATACAACAAATCTTTTGAAGCTTCGCGTCTTAAAGAAATGGCTGAATTCATTAATGAAGAAATA
TATGAATTAAAGGTTAGCGAAATAATTAAAAACATGTATGATTTAGCTGATTTTTTTATAGTTTCAATGGGAAAGCAATT
AATTGTAATTCCTGAATTAAAAGGTTTTTATTCAATTAAAAAAGTCTTACCAATTATTGAAAAAGAATTTCCACAAATTT
ATCACGATGTTAATTGTTTAAACTACAAAGAACTAAGTGTGGGTAATGGTTTGGTTTGTCAAACAAAAACAACAAAACGT
TTTTTCAATACAATTACTGATCTAGAATGAGAACAATTTGTACATGACGCTCGTATTTATTGCGAAAATGATGTCCGTGC
TATGATTGCTGTTGAATATTTTATTAAAAAACTTATTGATGAAGCTAAAATGAAAAATTTAATTTTAAGTTAA

Upstream 100 bases:

>100_bases
ATATGTTTTAAATGAAAATAAATAAAGTTTTTTTAAATAATGTTCGTTTATTGAACATTATTTTTTTATATATAATTAAT
GTTATAAAGTGAGGTTATCA

Downstream 100 bases:

>100_bases
TATAAAAAACTCTAGTGTTATTTTAAAGATACTAACTAGAGTTTTTTATATTAATTATTTTTTATTATTTGTTTCTGTAA
GTGACAAAGGAATGTAATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 690; Mature: 690

Protein sequence:

>690_residues
MRTGKYITKYDYIGYYTKQKAMWFFTNAEIKAKIDLLLKNVSSYDFEDLDDEEEHDYEIDAYEIYKEQTDFLSQLEINKN
IDVDNPKIAEGILLDKASQEDIKKTYHYIKKIINFETDPLFKNKSLEELANLTLELIDKNDKIIFFQPVFINDKLITKPD
CFIKKNDEFIVIETKGTSSIKKHHILDVFYQAQVISKHPYFINKCISYQMCIVDYVKLKKNQVNFTISPYYNYQKSVVLS
LPPSAANQFNKFEINELKRKRKRGEAIYLKKDENKKYYEDIDAYDHCKGILIDDLIDGTYSSINDYKEAKKIYDYKTEDL
KDDVRFNKTMDELIKGIEKLHNDFDEVISELLVHKQNLLALPIEQRIPNYFIPSYNDKGDYKDNDFWLELRNLYAYSGYD
VIKYSGKILTIKKFGLDNVTKDILGIDILKTYANQTFFNLYKNNQIKIYQAAVDLFAKLKSKKVYFDFESINSAIRAVDN
SFPFTQTVTQNSIIIDDGSCDIKNLKCTNMIIDPREINNEWFKAIIDKIHQGLEYSYIVYNKSFEASRLKEMAEFINEEI
YELKVSEIIKNMYDLADFFIVSMGKQLIVIPELKGFYSIKKVLPIIEKEFPQIYHDVNCLNYKELSVGNGLVCQTKTTKR
FFNTITDLEWEQFVHDARIYCENDVRAMIAVEYFIKKLIDEAKMKNLILS

Sequences:

>Translated_690_residues
MRTGKYITKYDYIGYYTKQKAMWFFTNAEIKAKIDLLLKNVSSYDFEDLDDEEEHDYEIDAYEIYKEQTDFLSQLEINKN
IDVDNPKIAEGILLDKASQEDIKKTYHYIKKIINFETDPLFKNKSLEELANLTLELIDKNDKIIFFQPVFINDKLITKPD
CFIKKNDEFIVIETKGTSSIKKHHILDVFYQAQVISKHPYFINKCISYQMCIVDYVKLKKNQVNFTISPYYNYQKSVVLS
LPPSAANQFNKFEINELKRKRKRGEAIYLKKDENKKYYEDIDAYDHCKGILIDDLIDGTYSSINDYKEAKKIYDYKTEDL
KDDVRFNKTMDELIKGIEKLHNDFDEVISELLVHKQNLLALPIEQRIPNYFIPSYNDKGDYKDNDF*LELRNLYAYSGYD
VIKYSGKILTIKKFGLDNVTKDILGIDILKTYANQTFFNLYKNNQIKIYQAAVDLFAKLKSKKVYFDFESINSAIRAVDN
SFPFTQTVTQNSIIIDDGSCDIKNLKCTNMIIDPREINNEWFKAIIDKIHQGLEYSYIVYNKSFEASRLKEMAEFINEEI
YELKVSEIIKNMYDLADFFIVSMGKQLIVIPELKGFYSIKKVLPIIEKEFPQIYHDVNCLNYKELSVGNGLVCQTKTTKR
FFNTITDLE*EQFVHDARIYCENDVRAMIAVEYFIKKLIDEAKMKNLILS
>Mature_690_residues
MRTGKYITKYDYIGYYTKQKAMWFFTNAEIKAKIDLLLKNVSSYDFEDLDDEEEHDYEIDAYEIYKEQTDFLSQLEINKN
IDVDNPKIAEGILLDKASQEDIKKTYHYIKKIINFETDPLFKNKSLEELANLTLELIDKNDKIIFFQPVFINDKLITKPD
CFIKKNDEFIVIETKGTSSIKKHHILDVFYQAQVISKHPYFINKCISYQMCIVDYVKLKKNQVNFTISPYYNYQKSVVLS
LPPSAANQFNKFEINELKRKRKRGEAIYLKKDENKKYYEDIDAYDHCKGILIDDLIDGTYSSINDYKEAKKIYDYKTEDL
KDDVRFNKTMDELIKGIEKLHNDFDEVISELLVHKQNLLALPIEQRIPNYFIPSYNDKGDYKDNDF*LELRNLYAYSGYD
VIKYSGKILTIKKFGLDNVTKDILGIDILKTYANQTFFNLYKNNQIKIYQAAVDLFAKLKSKKVYFDFESINSAIRAVDN
SFPFTQTVTQNSIIIDDGSCDIKNLKCTNMIIDPREINNEWFKAIIDKIHQGLEYSYIVYNKSFEASRLKEMAEFINEEI
YELKVSEIIKNMYDLADFFIVSMGKQLIVIPELKGFYSIKKVLPIIEKEFPQIYHDVNCLNYKELSVGNGLVCQTKTTKR
FFNTITDLE*EQFVHDARIYCENDVRAMIAVEYFIKKLIDEAKMKNLILS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.genitalium MG366 and M.pneumoniae MPN544 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021301 [H]

Pfam domain/function: PF11074 DUF2779 [H]

EC number: NA

Molecular weight: Translated: 80960; Mature: 80960

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTGKYITKYDYIGYYTKQKAMWFFTNAEIKAKIDLLLKNVSSYDFEDLDDEEEHDYEID
CCCCCEEEEECCEEEEECCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
AYEIYKEQTDFLSQLEINKNIDVDNPKIAEGILLDKASQEDIKKTYHYIKKIINFETDPL
HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHEECCCCHHHHHHHHHHHHHHHCCCCCCC
FKNKSLEELANLTLELIDKNDKIIFFQPVFINDKLITKPDCFIKKNDEFIVIETKGTSSI
CCCCCHHHHHHHEEEEECCCCCEEEEEEEEECCEEECCCCCEEECCCCEEEEEECCCCHH
KKHHILDVFYQAQVISKHPYFINKCISYQMCIVDYVKLKKNQVNFTISPYYNYQKSVVLS
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEE
LPPSAANQFNKFEINELKRKRKRGEAIYLKKDENKKYYEDIDAYDHCKGILIDDLIDGTY
CCCHHHHCCCCCCHHHHHHHHHCCCEEEEEECCCCHHHHHCCHHHHHCCCCHHHHHCCCH
SSINDYKEAKKIYDYKTEDLKDDVRFNKTMDELIKGIEKLHNDFDEVISELLVHKQNLLA
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
LPIEQRIPNYFIPSYNDKGDYKDNDFLELRNLYAYSGYDVIKYSGKILTIKKFGLDNVTK
EEHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCEEEEEEECCCCHHHH
DILGIDILKTYANQTFFNLYKNNQIKIYQAAVDLFAKLKSKKVYFDFESINSAIRAVDNS
HHHHHHHHHHHHCCCEEEEECCCEEEEHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHCCC
FPFTQTVTQNSIIIDDGSCDIKNLKCTNMIIDPREINNEWFKAIIDKIHQGLEYSYIVYN
CCCEEEECCCEEEEECCCCCCCCEEECCEEECHHHHCHHHHHHHHHHHHCCCCEEEEEEE
KSFEASRLKEMAEFINEEIYELKVSEIIKNMYDLADFFIVSMGKQLIVIPELKGFYSIKK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHH
VLPIIEKEFPQIYHDVNCLNYKELSVGNGLVCQTKTTKRFFNTITDLEEQFVHDARIYCE
HHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHEEEC
NDVRAMIAVEYFIKKLIDEAKMKNLILS
CCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRTGKYITKYDYIGYYTKQKAMWFFTNAEIKAKIDLLLKNVSSYDFEDLDDEEEHDYEID
CCCCCEEEEECCEEEEECCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
AYEIYKEQTDFLSQLEINKNIDVDNPKIAEGILLDKASQEDIKKTYHYIKKIINFETDPL
HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHEECCCCHHHHHHHHHHHHHHHCCCCCCC
FKNKSLEELANLTLELIDKNDKIIFFQPVFINDKLITKPDCFIKKNDEFIVIETKGTSSI
CCCCCHHHHHHHEEEEECCCCCEEEEEEEEECCEEECCCCCEEECCCCEEEEEECCCCHH
KKHHILDVFYQAQVISKHPYFINKCISYQMCIVDYVKLKKNQVNFTISPYYNYQKSVVLS
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEE
LPPSAANQFNKFEINELKRKRKRGEAIYLKKDENKKYYEDIDAYDHCKGILIDDLIDGTY
CCCHHHHCCCCCCHHHHHHHHHCCCEEEEEECCCCHHHHHCCHHHHHCCCCHHHHHCCCH
SSINDYKEAKKIYDYKTEDLKDDVRFNKTMDELIKGIEKLHNDFDEVISELLVHKQNLLA
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
LPIEQRIPNYFIPSYNDKGDYKDNDFLELRNLYAYSGYDVIKYSGKILTIKKFGLDNVTK
EEHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCEEEEEEECCCCHHHH
DILGIDILKTYANQTFFNLYKNNQIKIYQAAVDLFAKLKSKKVYFDFESINSAIRAVDNS
HHHHHHHHHHHHCCCEEEEECCCEEEEHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHCCC
FPFTQTVTQNSIIIDDGSCDIKNLKCTNMIIDPREINNEWFKAIIDKIHQGLEYSYIVYN
CCCEEEECCCEEEEECCCCCCCCEEECCEEECHHHHCHHHHHHHHHHHHCCCCEEEEEEE
KSFEASRLKEMAEFINEEIYELKVSEIIKNMYDLADFFIVSMGKQLIVIPELKGFYSIKK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHH
VLPIIEKEFPQIYHDVNCLNYKELSVGNGLVCQTKTTKRFFNTITDLEEQFVHDARIYCE
HHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHEEEC
NDVRAMIAVEYFIKKLIDEAKMKNLILS
CCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11048724 [H]