| Definition | Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome. |
|---|---|
| Accession | NC_002162 |
| Length | 751,719 |
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Identifier: 13357728
GI number: 13357728
Start: 208517
End: 208960
Strand: Reverse
Name: Not Available
Synonym: UU170
Alternate gene names: NA
Gene position: 208960-208517 (Counterclockwise)
Preceding gene: 13357729
Following gene: 13357727
Centisome position: 27.8
GC content: 30.63
Gene sequence:
>444_bases ATGATGAAAAGAAACGAACTAAAACAATTACAAGAACTGCAGTTAAAAATCAATGACTTTTACACTTTGGTTATGACTAC TAAAAACCTAGATTTATGTAATTTGAGTGCTTTGCTTGAATTCTTAGGCATAAATTGGGGCGTGTGAGTTAATTTAAGCA CGCAAAGAGACGAGTTTAACAAAAAAAGGTATGAATACATTACCAAGGCTAATTACGGCCTTAGAATGGCTTTAAATGAG TTGCTGGGACGAAACGCATCGTATGATAAAGAAATAAACAACCAAGGATTGCGTAAGTTTAGAACGCAAGAATATTTTAA ACGTCTAGATTTTGAGTTAGCAAATGAGCAAAAAAGTACAGATATTGAAGATACAACAATAACGTTTGAAAAAGTTGATG ATAATAACAAATTAACCATTAAAAAACTTATAAATGTGATATAA
Upstream 100 bases:
>100_bases CGCTACTTCCTTACGATAACGTTTTAGATTGTACTATTGATTGATAAACTAAACGATGATCTAATTTAAATTTTATGTGC GATGTGGTTATAATTTTTGT
Downstream 100 bases:
>100_bases TATTTATGACTAGAAAAAACGAACAAAGAGCAACGTTTTTTAGATATGTTAGATATCCTTTTAAAGCACCTGAATATTGC CGCTTACAAAAATAAGTCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MMKRNELKQLQELQLKINDFYTLVMTTKNLDLCNLSALLEFLGINWGVWVNLSTQRDEFNKKRYEYITKANYGLRMALNE LLGRNASYDKEINNQGLRKFRTQEYFKRLDFELANEQKSTDIEDTTITFEKVDDNNKLTIKKLINVI
Sequences:
>Translated_147_residues MMKRNELKQLQELQLKINDFYTLVMTTKNLDLCNLSALLEFLGINWGV*VNLSTQRDEFNKKRYEYITKANYGLRMALNE LLGRNASYDKEINNQGLRKFRTQEYFKRLDFELANEQKSTDIEDTTITFEKVDDNNKLTIKKLINVI >Mature_147_residues MMKRNELKQLQELQLKINDFYTLVMTTKNLDLCNLSALLEFLGINWGV*VNLSTQRDEFNKKRYEYITKANYGLRMALNE LLGRNASYDKEINNQGLRKFRTQEYFKRLDFELANEQKSTDIEDTTITFEKVDDNNKLTIKKLINVI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17295; Mature: 17295
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKRNELKQLQELQLKINDFYTLVMTTKNLDLCNLSALLEFLGINWGVVNLSTQRDEFNK CCCHHHHHHHHHHHHHHHHEEEEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHH KRYEYITKANYGLRMALNELLGRNASYDKEINNQGLRKFRTQEYFKRLDFELANEQKSTD HHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCC IEDTTITFEKVDDNNKLTIKKLINVI CCCCEEEEEEECCCCCEEHHHHHHCC >Mature Secondary Structure MMKRNELKQLQELQLKINDFYTLVMTTKNLDLCNLSALLEFLGINWGVVNLSTQRDEFNK CCCHHHHHHHHHHHHHHHHEEEEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHH KRYEYITKANYGLRMALNELLGRNASYDKEINNQGLRKFRTQEYFKRLDFELANEQKSTD HHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCC IEDTTITFEKVDDNNKLTIKKLINVI CCCCEEEEEEECCCCCEEHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11048724 [H]