Definition Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome.
Accession NC_002162
Length 751,719

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Identifier: 13357728

GI number: 13357728

Start: 208517

End: 208960

Strand: Reverse

Name: Not Available

Synonym: UU170

Alternate gene names: NA

Gene position: 208960-208517 (Counterclockwise)

Preceding gene: 13357729

Following gene: 13357727

Centisome position: 27.8

GC content: 30.63

Gene sequence:

>444_bases
ATGATGAAAAGAAACGAACTAAAACAATTACAAGAACTGCAGTTAAAAATCAATGACTTTTACACTTTGGTTATGACTAC
TAAAAACCTAGATTTATGTAATTTGAGTGCTTTGCTTGAATTCTTAGGCATAAATTGGGGCGTGTGAGTTAATTTAAGCA
CGCAAAGAGACGAGTTTAACAAAAAAAGGTATGAATACATTACCAAGGCTAATTACGGCCTTAGAATGGCTTTAAATGAG
TTGCTGGGACGAAACGCATCGTATGATAAAGAAATAAACAACCAAGGATTGCGTAAGTTTAGAACGCAAGAATATTTTAA
ACGTCTAGATTTTGAGTTAGCAAATGAGCAAAAAAGTACAGATATTGAAGATACAACAATAACGTTTGAAAAAGTTGATG
ATAATAACAAATTAACCATTAAAAAACTTATAAATGTGATATAA

Upstream 100 bases:

>100_bases
CGCTACTTCCTTACGATAACGTTTTAGATTGTACTATTGATTGATAAACTAAACGATGATCTAATTTAAATTTTATGTGC
GATGTGGTTATAATTTTTGT

Downstream 100 bases:

>100_bases
TATTTATGACTAGAAAAAACGAACAAAGAGCAACGTTTTTTAGATATGTTAGATATCCTTTTAAAGCACCTGAATATTGC
CGCTTACAAAAATAAGTCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MMKRNELKQLQELQLKINDFYTLVMTTKNLDLCNLSALLEFLGINWGVWVNLSTQRDEFNKKRYEYITKANYGLRMALNE
LLGRNASYDKEINNQGLRKFRTQEYFKRLDFELANEQKSTDIEDTTITFEKVDDNNKLTIKKLINVI

Sequences:

>Translated_147_residues
MMKRNELKQLQELQLKINDFYTLVMTTKNLDLCNLSALLEFLGINWGV*VNLSTQRDEFNKKRYEYITKANYGLRMALNE
LLGRNASYDKEINNQGLRKFRTQEYFKRLDFELANEQKSTDIEDTTITFEKVDDNNKLTIKKLINVI
>Mature_147_residues
MMKRNELKQLQELQLKINDFYTLVMTTKNLDLCNLSALLEFLGINWGV*VNLSTQRDEFNKKRYEYITKANYGLRMALNE
LLGRNASYDKEINNQGLRKFRTQEYFKRLDFELANEQKSTDIEDTTITFEKVDDNNKLTIKKLINVI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17295; Mature: 17295

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKRNELKQLQELQLKINDFYTLVMTTKNLDLCNLSALLEFLGINWGVVNLSTQRDEFNK
CCCHHHHHHHHHHHHHHHHEEEEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHH
KRYEYITKANYGLRMALNELLGRNASYDKEINNQGLRKFRTQEYFKRLDFELANEQKSTD
HHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCC
IEDTTITFEKVDDNNKLTIKKLINVI
CCCCEEEEEEECCCCCEEHHHHHHCC
>Mature Secondary Structure
MMKRNELKQLQELQLKINDFYTLVMTTKNLDLCNLSALLEFLGINWGVVNLSTQRDEFNK
CCCHHHHHHHHHHHHHHHHEEEEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHH
KRYEYITKANYGLRMALNELLGRNASYDKEINNQGLRKFRTQEYFKRLDFELANEQKSTD
HHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCC
IEDTTITFEKVDDNNKLTIKKLINVI
CCCCEEEEEEECCCCCEEHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11048724 [H]