| Definition | Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome. |
|---|---|
| Accession | NC_002162 |
| Length | 751,719 |
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Identifier: 13357726
GI number: 13357726
Start: 205712
End: 206725
Strand: Reverse
Name: Not Available
Synonym: UU168
Alternate gene names: NA
Gene position: 206725-205712 (Counterclockwise)
Preceding gene: 13357727
Following gene: 13357725
Centisome position: 27.5
GC content: 25.94
Gene sequence:
>1014_bases ATGGCACTTAAAACTAATACAATTATTAAAAGTAAATGAAATCCATCTAATTTTGATATTAACATTGACATTAAAGAAAT GATTGCACGAACTGCACAAGAAAGTACTGTTAATGATGTTATCTTAAAAACAAAAGATAATGTACCTTTGGAGTGGATGG AATTTATTGATAATATTAATGAAAACAACGAAATACTAAAACTAATTAAAGGTGATTGTCGTATTAAATCACTATATGGT ATTAACTATGTTGGTTTTGAAATATATAACAATGATATTTTAATTTTTAATGCAGATATTAATAACGCTATGAACAAATC CATTAGGATTAATCAACAACAAGAGTATAGCAGTACTATTTATCGTAAAATTGCGTTAATGAAAGATAGTGAATATTTAA GTTTAAAAGAACTACACACACCATACGAAATTAAACGATTAATCTATAACTCAACTGGTGTATATAAAATTATTTTTAAT GAATTTGAAGTTTCTACACCAATGTATTTTAAAGATATTTTTAAAAACAAAAACGTCGTACACAACTACGGCGTATTGTG CACAAAAGAGTTTTTAAATCGTTCATTTATTGACTTTGAAAATAAAATTAATGAGAAATTACCAGATTGATATCCAGTTA ATGATTTAATCAATGATACTAATGCTTTATTAAACTTTATTAAAAAAGAACGTGAATTAAACAAAACACGAATCGTTGGA TCAATTATTAATCACAATGACGCACAAACTTATCGTAATCAATGAATTGATGAAATACAGTACATGAGTTCAGATCTGAT ATTAAACACAAACACACCAGATAAAAACGCATTTGAAATTATGCAATCTACTTTTAACGAAAGTATTCACTTACAAGCCA TTACTGAAAAATTAAATTTAATCTTTAAAGGTTGTGGTTATGTATGAAATATGGGCGATAGTTTAAGCTATCAAAATAGC GAAACAGCAACTAATTTAAATAAAGCAACTTTTGAAACGCAAAAATGAAAGTAG
Upstream 100 bases:
>100_bases CATACGCATACGATTAATGCGTTGGAGTATTTAATGTGTGCGTTTCATTTATATTTTTATGCACAAGCACCTGCAATTAA TGAAAAAGGAGCTATAAGAT
Downstream 100 bases:
>100_bases AACTATACACCAATGATTGAATAGATTTTTTTAAAAATATTGCGATTGCATGATTTAAAACAAAACGTTATGGTAACAAG CGTTTAAGCTCAATTGAACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 337; Mature: 336
Protein sequence:
>337_residues MALKTNTIIKSKWNPSNFDINIDIKEMIARTAQESTVNDVILKTKDNVPLEWMEFIDNINENNEILKLIKGDCRIKSLYG INYVGFEIYNNDILIFNADINNAMNKSIRINQQQEYSSTIYRKIALMKDSEYLSLKELHTPYEIKRLIYNSTGVYKIIFN EFEVSTPMYFKDIFKNKNVVHNYGVLCTKEFLNRSFIDFENKINEKLPDWYPVNDLINDTNALLNFIKKERELNKTRIVG SIINHNDAQTYRNQWIDEIQYMSSDLILNTNTPDKNAFEIMQSTFNESIHLQAITEKLNLIFKGCGYVWNMGDSLSYQNS ETATNLNKATFETQKWK
Sequences:
>Translated_337_residues MALKTNTIIKSK*NPSNFDINIDIKEMIARTAQESTVNDVILKTKDNVPLEWMEFIDNINENNEILKLIKGDCRIKSLYG INYVGFEIYNNDILIFNADINNAMNKSIRINQQQEYSSTIYRKIALMKDSEYLSLKELHTPYEIKRLIYNSTGVYKIIFN EFEVSTPMYFKDIFKNKNVVHNYGVLCTKEFLNRSFIDFENKINEKLPD*YPVNDLINDTNALLNFIKKERELNKTRIVG SIINHNDAQTYRNQ*IDEIQYMSSDLILNTNTPDKNAFEIMQSTFNESIHLQAITEKLNLIFKGCGYV*NMGDSLSYQNS ETATNLNKATFETQK*K >Mature_336_residues ALKTNTIIKSK*NPSNFDINIDIKEMIARTAQESTVNDVILKTKDNVPLEWMEFIDNINENNEILKLIKGDCRIKSLYGI NYVGFEIYNNDILIFNADINNAMNKSIRINQQQEYSSTIYRKIALMKDSEYLSLKELHTPYEIKRLIYNSTGVYKIIFNE FEVSTPMYFKDIFKNKNVVHNYGVLCTKEFLNRSFIDFENKINEKLPD*YPVNDLINDTNALLNFIKKERELNKTRIVGS IINHNDAQTYRNQ*IDEIQYMSSDLILNTNTPDKNAFEIMQSTFNESIHLQAITEKLNLIFKGCGYV*NMGDSLSYQNSE TATNLNKATFETQK*K
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38540; Mature: 38409
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALKTNTIIKSKNPSNFDINIDIKEMIARTAQESTVNDVILKTKDNVPLEWMEFIDNINE CCCCCCCEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHCCCC NNEILKLIKGDCRIKSLYGINYVGFEIYNNDILIFNADINNAMNKSIRINQQQEYSSTIY CHHHHHHHHCCCEEEEEECCEEEEEEEECCEEEEEECCCCCCCCCCEEECCHHHHHHHHH RKIALMKDSEYLSLKELHTPYEIKRLIYNSTGVYKIIFNEFEVSTPMYFKDIFKNKNVVH HHHHHCCCCCCEEHHHHCCHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHCCCCEEE NYGVLCTKEFLNRSFIDFENKINEKLPDYPVNDLINDTNALLNFIKKERELNKTRIVGSI CCCCEEEHHHHCCHHHHHHHHHHHCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH INHNDAQTYRNQIDEIQYMSSDLILNTNTPDKNAFEIMQSTFNESIHLQAITEKLNLIFK HCCCHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHCCCEEEHHHHHHHHHHHH GCGYVNMGDSLSYQNSETATNLNKATFETQKK CCCCEECCCCCCCCCCCHHCCCCHHHHCCCCC >Mature Secondary Structure ALKTNTIIKSKNPSNFDINIDIKEMIARTAQESTVNDVILKTKDNVPLEWMEFIDNINE CCCCCCEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHCCCC NNEILKLIKGDCRIKSLYGINYVGFEIYNNDILIFNADINNAMNKSIRINQQQEYSSTIY CHHHHHHHHCCCEEEEEECCEEEEEEEECCEEEEEECCCCCCCCCCEEECCHHHHHHHHH RKIALMKDSEYLSLKELHTPYEIKRLIYNSTGVYKIIFNEFEVSTPMYFKDIFKNKNVVH HHHHHCCCCCCEEHHHHCCHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHCCCCEEE NYGVLCTKEFLNRSFIDFENKINEKLPDYPVNDLINDTNALLNFIKKERELNKTRIVGSI CCCCEEEHHHHCCHHHHHHHHHHHCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH INHNDAQTYRNQIDEIQYMSSDLILNTNTPDKNAFEIMQSTFNESIHLQAITEKLNLIFK HCCCHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHCCCEEEHHHHHHHHHHHH GCGYVNMGDSLSYQNSETATNLNKATFETQKK CCCCEECCCCCCCCCCCHHCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11048724 [H]