Definition Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome.
Accession NC_002162
Length 751,719

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Identifier: 13357726

GI number: 13357726

Start: 205712

End: 206725

Strand: Reverse

Name: Not Available

Synonym: UU168

Alternate gene names: NA

Gene position: 206725-205712 (Counterclockwise)

Preceding gene: 13357727

Following gene: 13357725

Centisome position: 27.5

GC content: 25.94

Gene sequence:

>1014_bases
ATGGCACTTAAAACTAATACAATTATTAAAAGTAAATGAAATCCATCTAATTTTGATATTAACATTGACATTAAAGAAAT
GATTGCACGAACTGCACAAGAAAGTACTGTTAATGATGTTATCTTAAAAACAAAAGATAATGTACCTTTGGAGTGGATGG
AATTTATTGATAATATTAATGAAAACAACGAAATACTAAAACTAATTAAAGGTGATTGTCGTATTAAATCACTATATGGT
ATTAACTATGTTGGTTTTGAAATATATAACAATGATATTTTAATTTTTAATGCAGATATTAATAACGCTATGAACAAATC
CATTAGGATTAATCAACAACAAGAGTATAGCAGTACTATTTATCGTAAAATTGCGTTAATGAAAGATAGTGAATATTTAA
GTTTAAAAGAACTACACACACCATACGAAATTAAACGATTAATCTATAACTCAACTGGTGTATATAAAATTATTTTTAAT
GAATTTGAAGTTTCTACACCAATGTATTTTAAAGATATTTTTAAAAACAAAAACGTCGTACACAACTACGGCGTATTGTG
CACAAAAGAGTTTTTAAATCGTTCATTTATTGACTTTGAAAATAAAATTAATGAGAAATTACCAGATTGATATCCAGTTA
ATGATTTAATCAATGATACTAATGCTTTATTAAACTTTATTAAAAAAGAACGTGAATTAAACAAAACACGAATCGTTGGA
TCAATTATTAATCACAATGACGCACAAACTTATCGTAATCAATGAATTGATGAAATACAGTACATGAGTTCAGATCTGAT
ATTAAACACAAACACACCAGATAAAAACGCATTTGAAATTATGCAATCTACTTTTAACGAAAGTATTCACTTACAAGCCA
TTACTGAAAAATTAAATTTAATCTTTAAAGGTTGTGGTTATGTATGAAATATGGGCGATAGTTTAAGCTATCAAAATAGC
GAAACAGCAACTAATTTAAATAAAGCAACTTTTGAAACGCAAAAATGAAAGTAG

Upstream 100 bases:

>100_bases
CATACGCATACGATTAATGCGTTGGAGTATTTAATGTGTGCGTTTCATTTATATTTTTATGCACAAGCACCTGCAATTAA
TGAAAAAGGAGCTATAAGAT

Downstream 100 bases:

>100_bases
AACTATACACCAATGATTGAATAGATTTTTTTAAAAATATTGCGATTGCATGATTTAAAACAAAACGTTATGGTAACAAG
CGTTTAAGCTCAATTGAACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 336

Protein sequence:

>337_residues
MALKTNTIIKSKWNPSNFDINIDIKEMIARTAQESTVNDVILKTKDNVPLEWMEFIDNINENNEILKLIKGDCRIKSLYG
INYVGFEIYNNDILIFNADINNAMNKSIRINQQQEYSSTIYRKIALMKDSEYLSLKELHTPYEIKRLIYNSTGVYKIIFN
EFEVSTPMYFKDIFKNKNVVHNYGVLCTKEFLNRSFIDFENKINEKLPDWYPVNDLINDTNALLNFIKKERELNKTRIVG
SIINHNDAQTYRNQWIDEIQYMSSDLILNTNTPDKNAFEIMQSTFNESIHLQAITEKLNLIFKGCGYVWNMGDSLSYQNS
ETATNLNKATFETQKWK

Sequences:

>Translated_337_residues
MALKTNTIIKSK*NPSNFDINIDIKEMIARTAQESTVNDVILKTKDNVPLEWMEFIDNINENNEILKLIKGDCRIKSLYG
INYVGFEIYNNDILIFNADINNAMNKSIRINQQQEYSSTIYRKIALMKDSEYLSLKELHTPYEIKRLIYNSTGVYKIIFN
EFEVSTPMYFKDIFKNKNVVHNYGVLCTKEFLNRSFIDFENKINEKLPD*YPVNDLINDTNALLNFIKKERELNKTRIVG
SIINHNDAQTYRNQ*IDEIQYMSSDLILNTNTPDKNAFEIMQSTFNESIHLQAITEKLNLIFKGCGYV*NMGDSLSYQNS
ETATNLNKATFETQK*K
>Mature_336_residues
ALKTNTIIKSK*NPSNFDINIDIKEMIARTAQESTVNDVILKTKDNVPLEWMEFIDNINENNEILKLIKGDCRIKSLYGI
NYVGFEIYNNDILIFNADINNAMNKSIRINQQQEYSSTIYRKIALMKDSEYLSLKELHTPYEIKRLIYNSTGVYKIIFNE
FEVSTPMYFKDIFKNKNVVHNYGVLCTKEFLNRSFIDFENKINEKLPD*YPVNDLINDTNALLNFIKKERELNKTRIVGS
IINHNDAQTYRNQ*IDEIQYMSSDLILNTNTPDKNAFEIMQSTFNESIHLQAITEKLNLIFKGCGYV*NMGDSLSYQNSE
TATNLNKATFETQK*K

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38540; Mature: 38409

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALKTNTIIKSKNPSNFDINIDIKEMIARTAQESTVNDVILKTKDNVPLEWMEFIDNINE
CCCCCCCEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHCCCC
NNEILKLIKGDCRIKSLYGINYVGFEIYNNDILIFNADINNAMNKSIRINQQQEYSSTIY
CHHHHHHHHCCCEEEEEECCEEEEEEEECCEEEEEECCCCCCCCCCEEECCHHHHHHHHH
RKIALMKDSEYLSLKELHTPYEIKRLIYNSTGVYKIIFNEFEVSTPMYFKDIFKNKNVVH
HHHHHCCCCCCEEHHHHCCHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHCCCCEEE
NYGVLCTKEFLNRSFIDFENKINEKLPDYPVNDLINDTNALLNFIKKERELNKTRIVGSI
CCCCEEEHHHHCCHHHHHHHHHHHCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
INHNDAQTYRNQIDEIQYMSSDLILNTNTPDKNAFEIMQSTFNESIHLQAITEKLNLIFK
HCCCHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHCCCEEEHHHHHHHHHHHH
GCGYVNMGDSLSYQNSETATNLNKATFETQKK
CCCCEECCCCCCCCCCCHHCCCCHHHHCCCCC
>Mature Secondary Structure 
ALKTNTIIKSKNPSNFDINIDIKEMIARTAQESTVNDVILKTKDNVPLEWMEFIDNINE
CCCCCCEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHCCCC
NNEILKLIKGDCRIKSLYGINYVGFEIYNNDILIFNADINNAMNKSIRINQQQEYSSTIY
CHHHHHHHHCCCEEEEEECCEEEEEEEECCEEEEEECCCCCCCCCCEEECCHHHHHHHHH
RKIALMKDSEYLSLKELHTPYEIKRLIYNSTGVYKIIFNEFEVSTPMYFKDIFKNKNVVH
HHHHHCCCCCCEEHHHHCCHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHCCCCEEE
NYGVLCTKEFLNRSFIDFENKINEKLPDYPVNDLINDTNALLNFIKKERELNKTRIVGSI
CCCCEEEHHHHCCHHHHHHHHHHHCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
INHNDAQTYRNQIDEIQYMSSDLILNTNTPDKNAFEIMQSTFNESIHLQAITEKLNLIFK
HCCCHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHCCCEEEHHHHHHHHHHHH
GCGYVNMGDSLSYQNSETATNLNKATFETQKK
CCCCEECCCCCCCCCCCHHCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11048724 [H]