Definition Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome.
Accession NC_002162
Length 751,719

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Identifier: 13357724

GI number: 13357724

Start: 202550

End: 205384

Strand: Reverse

Name: Not Available

Synonym: UU166

Alternate gene names: NA

Gene position: 205384-202550 (Counterclockwise)

Preceding gene: 13357725

Following gene: 13357723

Centisome position: 27.32

GC content: 28.57

Gene sequence:

>2835_bases
ATGGAGAGTTTGAAAATGAGTAATATTTATTTAGATGAACTTGAAGGTTATAGTCAAAAAAATATTGAAGACAGCATTGA
TAGTTTAATTGAACCAAACCAAAAACCAATTCATTTATGTCCATTTAGAATACTAAAAGGTTTTATTAAAATTACAAACA
CCGGTGAACAATCATTATTAGTAAATGACAAAGATTTTAGCACTGTTTGAAATATTAAAGCAAGTAATGAGCCAATCATT
GCGTATTGAGATAAATCATTTACGTATAACTTTAAAGGTAGTTTAAATTACATTAGTAAAGATTACGCACGTATTGATCC
AAGTAATACAACGCTAAAAAACAACTTTAAACCTTATTATTTTCAAGCATGAGTACAAAATTATTCCCAAGCAAATAATG
TATCTACAATTGTTTTTAATGATAAAGAACATACAGTTATTAAAACAATTACAACAGTTACTTTAATTGTTAAATATCCA
AGTGTTTATGAAGATGAAATATACCAAAATGAACAAGGTAATTTAGTTAGTCATAAAGCAAAGTTTAAACAATGAACTAC
AGATATGTTAAAAGAATATTTATTCATTATTCCAGATGAACACGCACAAGCTAATCAATGATTAATGGTTAATGAAGTCA
TTCCTTTTTATTCAACAACATCAAAACGTTATGAAGGAGCACAAATTACACTAACAAACGTTAACGATTTACTAACATCA
TCTGGTAATGATATATTAGCAACAATTCAACCATGTCAACCTGGAGATGGTTATTTATGACCAGTAATTCAAAATGGTAA
ATTAACATATGATGAACGTAAAGAAAAACCGTTAGGAGTTAAAAGTATTCAATTATTAACTAATGGACCATATGCATTAA
ATAGTATGTTAATAACAGGACGAACTTATAATAATGACACACGAGAGTTAAGTGCTAATAAGCGATTATTACTATATAAA
GCTAAAATACCAGTCGCATCTAAATTCTTTAATGTATCAGCACCAACAAGTAATTATGTATATTTATACAATGCGTTTTT
TGAAATTGAAAAGATTTATAAAGACCAGTATGAAAAACAAAAAGATTTTACATTTGACCATAACGCTAATATTAAATTAA
ATGGTGGATTATTATTAAATCATAAATGAGACGCAAGCAATAACGCACTAAGTTATGAAGACAATCGTTATCCATTTAAA
TTATGAGATGAAGGTTTTAAAATACATGCGAGCTTTTTTAACTTTAAATTAGGTGGAACAGGAGCACAAAAGGGCGGATC
ATTAACTGAAAATGCAGAACAAAAAAAGCCGTTAGCTGATGCTGTTGTAACTGGTCAAGTTGCTGGTGAAGTTGTGAGTA
CAGTGTTTGAAAGTATTGGACGTAATGTTTCACAAGGATTTAATTTAAATAATTTAGGTTTATGGTCTTTTAATATGGGA
TTTGCTAAAACCAAAGCTGAACAAATAAAAGAAGCAACTAAAATTGGATTAAACAACATTACAATGCCACCTGGTACTAA
TTTGCATACGTTTTTAAATCACAATGCATTTATGTATGATTTGATTAAGTATTTACCATATTCATACAAGGAAACAATCC
GTCAAAATCTTGGTGAATTAATAGATAATACACCACTTAGTTTAGGTAAAGTTAGACGTGGTATTGTAGATATTTTATAT
CCTGGTTGAACCAAAGTTGAAGACGCAACAGGTTATAACATGTCAAACATTTGATTAAATACACGTGGTTTTAATTTTAT
TGCACCATGTTTACCGCTTGAATTAGAAGTATCAAATAAACTAAAAGCGGATTTAATTAATTTAGATATTTTCACTAACA
AACCAGCTAAAACATTTAGTCCACTTGGCATACCAGCCATTGCTTGTTGTTATCATTTTGATATAACTGATAGATTTGCT
AAATTTGTAGATGATGAGCTAAAAGTATTTGATACTGAACTAATTGGACAAACAACATATCGTGATGGTACGTATATAAG
AAAAGATAAAAAACCTTTATATTGAGATAGTTTCTGTGAAGCATTACCACCAAACACACCGCTTAGTTATGAACCAGCTG
TTATTAATATAGCGTCTGGTAAACGTGAAGATGTTAATCGTGTTAAATATCCTTATGTAATTGATACGATTGATATTAAA
GGCTTGGGTAAGTGTGATATTAAACTAACAGCTTTTAGTGGCTTTTATTCACCAGATGCACGATTAAAAGACGAATTTAA
AAACGTGTACGAAGCGATTTTTGAAAGCAATGGAAAATATACTGATGATATGAGTCAATGAAGCAACTATATTAATTTTT
CAACGCTTGATGAGATTAATTCAGTTGGAACTAAACTAAGTTATCCAAAGCCACCAGTTGAAACTGATTTTTTAAAAAAT
ACTAAAACAAATAGTGATGATGGAGTTAATGCAAGTTTACAAACAATTAATGAAACATTATATAAAGTGGGCGATAATTC
ATTATTAAGTGCTACGCAATATAGAAAACCACGCTTTTATTTTTATGAACCAGACAGTTCTAAATTAGCAAATCTATTTG
GTTATGGTTCATATACTAATAAACTAAATTATTTATTTGGTGGAAGTAATTTAAGTGATGTAATTGTTGCTAATAAAGTT
ATTGCTTATAGTTTTGTGTTTAAATGAGATTTTAATTATCGTGAATGGTTAAATTTAGGTTCAGTTAATAAAACAAAACG
TAATTTAAAACTAACATTTGAGATTGAAAGTAATTGGATACAGAAAGGATGAACAAATCAGTTTAACGTTGATAATAGTT
TCAATCAGCTAATAACTTTGTTGGTTTTGAACTAA

Upstream 100 bases:

>100_bases
ATGCCACTTAATTTAGCTGTACAAAAATTATATCCAGAACTTACACCTACCGAACAAGATGAACTAGTAAAAGAATTAGA
ACATAAACAAAAACTAGAAA

Downstream 100 bases:

>100_bases
CAAAAGATAATAAATTAAAATATGGTGGTAATTATGCAGTAGATTTAAACACACCAAATAAAAAATCAACAATTAGTACA
TTTAGTATTAAAGCTGATGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 944; Mature: 944

Protein sequence:

>944_residues
MESLKMSNIYLDELEGYSQKNIEDSIDSLIEPNQKPIHLCPFRILKGFIKITNTGEQSLLVNDKDFSTVWNIKASNEPII
AYWDKSFTYNFKGSLNYISKDYARIDPSNTTLKNNFKPYYFQAWVQNYSQANNVSTIVFNDKEHTVIKTITTVTLIVKYP
SVYEDEIYQNEQGNLVSHKAKFKQWTTDMLKEYLFIIPDEHAQANQWLMVNEVIPFYSTTSKRYEGAQITLTNVNDLLTS
SGNDILATIQPCQPGDGYLWPVIQNGKLTYDERKEKPLGVKSIQLLTNGPYALNSMLITGRTYNNDTRELSANKRLLLYK
AKIPVASKFFNVSAPTSNYVYLYNAFFEIEKIYKDQYEKQKDFTFDHNANIKLNGGLLLNHKWDASNNALSYEDNRYPFK
LWDEGFKIHASFFNFKLGGTGAQKGGSLTENAEQKKPLADAVVTGQVAGEVVSTVFESIGRNVSQGFNLNNLGLWSFNMG
FAKTKAEQIKEATKIGLNNITMPPGTNLHTFLNHNAFMYDLIKYLPYSYKETIRQNLGELIDNTPLSLGKVRRGIVDILY
PGWTKVEDATGYNMSNIWLNTRGFNFIAPCLPLELEVSNKLKADLINLDIFTNKPAKTFSPLGIPAIACCYHFDITDRFA
KFVDDELKVFDTELIGQTTYRDGTYIRKDKKPLYWDSFCEALPPNTPLSYEPAVINIASGKREDVNRVKYPYVIDTIDIK
GLGKCDIKLTAFSGFYSPDARLKDEFKNVYEAIFESNGKYTDDMSQWSNYINFSTLDEINSVGTKLSYPKPPVETDFLKN
TKTNSDDGVNASLQTINETLYKVGDNSLLSATQYRKPRFYFYEPDSSKLANLFGYGSYTNKLNYLFGGSNLSDVIVANKV
IAYSFVFKWDFNYREWLNLGSVNKTKRNLKLTFEIESNWIQKGWTNQFNVDNSFNQLITLLVLN

Sequences:

>Translated_944_residues
MESLKMSNIYLDELEGYSQKNIEDSIDSLIEPNQKPIHLCPFRILKGFIKITNTGEQSLLVNDKDFSTV*NIKASNEPII
AY*DKSFTYNFKGSLNYISKDYARIDPSNTTLKNNFKPYYFQA*VQNYSQANNVSTIVFNDKEHTVIKTITTVTLIVKYP
SVYEDEIYQNEQGNLVSHKAKFKQ*TTDMLKEYLFIIPDEHAQANQ*LMVNEVIPFYSTTSKRYEGAQITLTNVNDLLTS
SGNDILATIQPCQPGDGYL*PVIQNGKLTYDERKEKPLGVKSIQLLTNGPYALNSMLITGRTYNNDTRELSANKRLLLYK
AKIPVASKFFNVSAPTSNYVYLYNAFFEIEKIYKDQYEKQKDFTFDHNANIKLNGGLLLNHK*DASNNALSYEDNRYPFK
L*DEGFKIHASFFNFKLGGTGAQKGGSLTENAEQKKPLADAVVTGQVAGEVVSTVFESIGRNVSQGFNLNNLGLWSFNMG
FAKTKAEQIKEATKIGLNNITMPPGTNLHTFLNHNAFMYDLIKYLPYSYKETIRQNLGELIDNTPLSLGKVRRGIVDILY
PG*TKVEDATGYNMSNI*LNTRGFNFIAPCLPLELEVSNKLKADLINLDIFTNKPAKTFSPLGIPAIACCYHFDITDRFA
KFVDDELKVFDTELIGQTTYRDGTYIRKDKKPLY*DSFCEALPPNTPLSYEPAVINIASGKREDVNRVKYPYVIDTIDIK
GLGKCDIKLTAFSGFYSPDARLKDEFKNVYEAIFESNGKYTDDMSQ*SNYINFSTLDEINSVGTKLSYPKPPVETDFLKN
TKTNSDDGVNASLQTINETLYKVGDNSLLSATQYRKPRFYFYEPDSSKLANLFGYGSYTNKLNYLFGGSNLSDVIVANKV
IAYSFVFK*DFNYREWLNLGSVNKTKRNLKLTFEIESNWIQKG*TNQFNVDNSFNQLITLLVLN
>Mature_944_residues
MESLKMSNIYLDELEGYSQKNIEDSIDSLIEPNQKPIHLCPFRILKGFIKITNTGEQSLLVNDKDFSTV*NIKASNEPII
AY*DKSFTYNFKGSLNYISKDYARIDPSNTTLKNNFKPYYFQA*VQNYSQANNVSTIVFNDKEHTVIKTITTVTLIVKYP
SVYEDEIYQNEQGNLVSHKAKFKQ*TTDMLKEYLFIIPDEHAQANQ*LMVNEVIPFYSTTSKRYEGAQITLTNVNDLLTS
SGNDILATIQPCQPGDGYL*PVIQNGKLTYDERKEKPLGVKSIQLLTNGPYALNSMLITGRTYNNDTRELSANKRLLLYK
AKIPVASKFFNVSAPTSNYVYLYNAFFEIEKIYKDQYEKQKDFTFDHNANIKLNGGLLLNHK*DASNNALSYEDNRYPFK
L*DEGFKIHASFFNFKLGGTGAQKGGSLTENAEQKKPLADAVVTGQVAGEVVSTVFESIGRNVSQGFNLNNLGLWSFNMG
FAKTKAEQIKEATKIGLNNITMPPGTNLHTFLNHNAFMYDLIKYLPYSYKETIRQNLGELIDNTPLSLGKVRRGIVDILY
PG*TKVEDATGYNMSNI*LNTRGFNFIAPCLPLELEVSNKLKADLINLDIFTNKPAKTFSPLGIPAIACCYHFDITDRFA
KFVDDELKVFDTELIGQTTYRDGTYIRKDKKPLY*DSFCEALPPNTPLSYEPAVINIASGKREDVNRVKYPYVIDTIDIK
GLGKCDIKLTAFSGFYSPDARLKDEFKNVYEAIFESNGKYTDDMSQ*SNYINFSTLDEINSVGTKLSYPKPPVETDFLKN
TKTNSDDGVNASLQTINETLYKVGDNSLLSATQYRKPRFYFYEPDSSKLANLFGYGSYTNKLNYLFGGSNLSDVIVANKV
IAYSFVFK*DFNYREWLNLGSVNKTKRNLKLTFEIESNWIQKG*TNQFNVDNSFNQLITLLVLN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 105066; Mature: 105066

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESLKMSNIYLDELEGYSQKNIEDSIDSLIEPNQKPIHLCPFRILKGFIKITNTGEQSLL
CCCCCCCCEEHHHHCCCCCCCHHHHHHHHHCCCCCCEEECHHHHHHHHEEEECCCCCEEE
VNDKDFSTVNIKASNEPIIAYDKSFTYNFKGSLNYISKDYARIDPSNTTLKNNFKPYYFQ
EECCCCEEEEEEECCCCEEEECCCEEEEECCCCCHHHCHHHEECCCCCEECCCCCHHHHH
AVQNYSQANNVSTIVFNDKEHTVIKTITTVTLIVKYPSVYEDEIYQNEQGNLVSHKAKFK
HHHHHHHCCCEEEEEECCCCCEEEEHEEEEEEEEECCCCHHHHHHCCCCCCEEHHHHHHH
QTTDMLKEYLFIIPDEHAQANQLMVNEVIPFYSTTSKRYEGAQITLTNVNDLLTSSGNDI
HHHHHHHHHEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEECHHHHHHCCCCCE
LATIQPCQPGDGYLPVIQNGKLTYDERKEKPLGVKSIQLLTNGPYALNSMLITGRTYNND
EEEEECCCCCCCEEEEEECCEECCHHCCCCCCCCEEEEEEECCCCEEEEEEEECCCCCCC
TRELSANKRLLLYKAKIPVASKFFNVSAPTSNYVYLYNAFFEIEKIYKDQYEKQKDFTFD
HHHHCCCCEEEEEEECCCCHHHEEECCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCC
HNANIKLNGGLLLNHKDASNNALSYEDNRYPFKLDEGFKIHASFFNFKLGGTGAQKGGSL
CCCCEEECCCEEEECCCCCCCCCCCCCCCCCEEECCCCEEEEEEEEEEECCCCCCCCCCC
TENAEQKKPLADAVVTGQVAGEVVSTVFESIGRNVSQGFNLNNLGLWSFNMGFAKTKAEQ
CCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCEEEEEECCCHHHHHHHH
IKEATKIGLNNITMPPGTNLHTFLNHNAFMYDLIKYLPYSYKETIRQNLGELIDNTPLSL
HHHHHHCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCH
GKVRRGIVDILYPGTKVEDATGYNMSNILNTRGFNFIAPCLPLELEVSNKLKADLINLDI
HHHHHHHEEEECCCCCCCCCCCCCHHHHHHCCCCCEECCCCCEEEECCCCCEEEEEEEEE
FTNKPAKTFSPLGIPAIACCYHFDITDRFAKFVDDELKVFDTELIGQTTYRDGTYIRKDK
EECCCCCCCCCCCCCCEEEEEECCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCEEECCC
KPLYDSFCEALPPNTPLSYEPAVINIASGKREDVNRVKYPYVIDTIDIKGLGKCDIKLTA
CCHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHCCCCEEEEEEEECCCCCEEEEEEE
FSGFYSPDARLKDEFKNVYEAIFESNGKYTDDMSQSNYINFSTLDEINSVGTKLSYPKPP
ECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCHHHHHHHHHCCCCCCCCCC
VETDFLKNTKTNSDDGVNASLQTINETLYKVGDNSLLSATQYRKPRFYFYEPDSSKLANL
CCHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHCCCCEEEEECCCCHHHHHH
FGYGSYTNKLNYLFGGSNLSDVIVANKVIAYSFVFKDFNYREWLNLGSVNKTKRNLKLTF
HCCCCCCCCEEEEECCCCCCHHHHHHHHHEEEEECCCCCHHHHHCCCCCCCCCCCEEEEE
EIESNWIQKGTNQFNVDNSFNQLITLLVLN
EECCCHHHCCCCEECCCCCHHHEEEEEEEC
>Mature Secondary Structure
MESLKMSNIYLDELEGYSQKNIEDSIDSLIEPNQKPIHLCPFRILKGFIKITNTGEQSLL
CCCCCCCCEEHHHHCCCCCCCHHHHHHHHHCCCCCCEEECHHHHHHHHEEEECCCCCEEE
VNDKDFSTVNIKASNEPIIAYDKSFTYNFKGSLNYISKDYARIDPSNTTLKNNFKPYYFQ
EECCCCEEEEEEECCCCEEEECCCEEEEECCCCCHHHCHHHEECCCCCEECCCCCHHHHH
AVQNYSQANNVSTIVFNDKEHTVIKTITTVTLIVKYPSVYEDEIYQNEQGNLVSHKAKFK
HHHHHHHCCCEEEEEECCCCCEEEEHEEEEEEEEECCCCHHHHHHCCCCCCEEHHHHHHH
QTTDMLKEYLFIIPDEHAQANQLMVNEVIPFYSTTSKRYEGAQITLTNVNDLLTSSGNDI
HHHHHHHHHEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEECHHHHHHCCCCCE
LATIQPCQPGDGYLPVIQNGKLTYDERKEKPLGVKSIQLLTNGPYALNSMLITGRTYNND
EEEEECCCCCCCEEEEEECCEECCHHCCCCCCCCEEEEEEECCCCEEEEEEEECCCCCCC
TRELSANKRLLLYKAKIPVASKFFNVSAPTSNYVYLYNAFFEIEKIYKDQYEKQKDFTFD
HHHHCCCCEEEEEEECCCCHHHEEECCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCC
HNANIKLNGGLLLNHKDASNNALSYEDNRYPFKLDEGFKIHASFFNFKLGGTGAQKGGSL
CCCCEEECCCEEEECCCCCCCCCCCCCCCCCEEECCCCEEEEEEEEEEECCCCCCCCCCC
TENAEQKKPLADAVVTGQVAGEVVSTVFESIGRNVSQGFNLNNLGLWSFNMGFAKTKAEQ
CCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCEEEEEECCCHHHHHHHH
IKEATKIGLNNITMPPGTNLHTFLNHNAFMYDLIKYLPYSYKETIRQNLGELIDNTPLSL
HHHHHHCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCH
GKVRRGIVDILYPGTKVEDATGYNMSNILNTRGFNFIAPCLPLELEVSNKLKADLINLDI
HHHHHHHEEEECCCCCCCCCCCCCHHHHHHCCCCCEECCCCCEEEECCCCCEEEEEEEEE
FTNKPAKTFSPLGIPAIACCYHFDITDRFAKFVDDELKVFDTELIGQTTYRDGTYIRKDK
EECCCCCCCCCCCCCCEEEEEECCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCEEECCC
KPLYDSFCEALPPNTPLSYEPAVINIASGKREDVNRVKYPYVIDTIDIKGLGKCDIKLTA
CCHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHCCCCEEEEEEEECCCCCEEEEEEE
FSGFYSPDARLKDEFKNVYEAIFESNGKYTDDMSQSNYINFSTLDEINSVGTKLSYPKPP
ECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCHHHHHHHHHCCCCCCCCCC
VETDFLKNTKTNSDDGVNASLQTINETLYKVGDNSLLSATQYRKPRFYFYEPDSSKLANL
CCHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHCCCCEEEEECCCCHHHHHH
FGYGSYTNKLNYLFGGSNLSDVIVANKVIAYSFVFKDFNYREWLNLGSVNKTKRNLKLTF
HCCCCCCCCEEEEECCCCCCHHHHHHHHHEEEEECCCCCHHHHHCCCCCCCCCCCEEEEE
EIESNWIQKGTNQFNVDNSFNQLITLLVLN
EECCCHHHCCCCEECCCCCHHHEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11048724 [H]