Definition Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome.
Accession NC_002162
Length 751,719

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Identifier: 13357723

GI number: 13357723

Start: 201509

End: 201877

Strand: Reverse

Name: Not Available

Synonym: UU165.2

Alternate gene names: NA

Gene position: 201877-201509 (Counterclockwise)

Preceding gene: 13357724

Following gene: 13357722

Centisome position: 26.86

GC content: 27.1

Gene sequence:

>369_bases
ATGAACAAAATAATTAAATTTCACAACGAACGTATTAAGTGATTATGAATTCTAACTGCTATATTAGCAATTTCATTTTT
TGTAATTTGTTTTAATAATGTTAAGTGAATTTATACTGAAAACACTGCTAAATATGAGTTATTAACTAGTTCATTAGAAA
AAATTGTGAAATTTTACTCTTTTAGTTTAGTTGATAAACCATTCGCAAGAGGAGTACCAAACAGTATTGATGTATTCTCT
CGAGCCATTATCGGTGTAGCGTTTGGCTTAGGATTTGTAGGAACTATGCTAATTGATTATTTCATAATCTCAAAAGTTGC
GTATATTGTGAAACAAAAAATAAAACAATCTAAGAAAGTAGGTATGTAA

Upstream 100 bases:

>100_bases
GATTTAAGCGATGTTATTAAAGAATTAGAGACAAATAACTGTATTAAATCAAAAACCATTAAATTAAAAACAATTGAATT
AGTGGAGTAAAATATATAGT

Downstream 100 bases:

>100_bases
ATATGGTTGATGAACTTGAAAAAAATCAAGTTCAACCACAAGAAACTGAAGAAAATAAAGAAAATGCTTTATATGATGAA
ATTGACAAACGTATTCAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MNKIIKFHNERIKWLWILTAILAISFFVICFNNVKWIYTENTAKYELLTSSLEKIVKFYSFSLVDKPFARGVPNSIDVFS
RAIIGVAFGLGFVGTMLIDYFIISKVAYIVKQKIKQSKKVGM

Sequences:

>Translated_122_residues
MNKIIKFHNERIK*L*ILTAILAISFFVICFNNVK*IYTENTAKYELLTSSLEKIVKFYSFSLVDKPFARGVPNSIDVFS
RAIIGVAFGLGFVGTMLIDYFIISKVAYIVKQKIKQSKKVGM
>Mature_122_residues
MNKIIKFHNERIK*L*ILTAILAISFFVICFNNVK*IYTENTAKYELLTSSLEKIVKFYSFSLVDKPFARGVPNSIDVFS
RAIIGVAFGLGFVGTMLIDYFIISKVAYIVKQKIKQSKKVGM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13454; Mature: 13454

Theoretical pI: Translated: 10.47; Mature: 10.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKIIKFHNERIKLILTAILAISFFVICFNNVKIYTENTAKYELLTSSLEKIVKFYSFSL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHH
VDKPFARGVPNSIDVFSRAIIGVAFGLGFVGTMLIDYFIISKVAYIVKQKIKQSKKVGM
HCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNKIIKFHNERIKLILTAILAISFFVICFNNVKIYTENTAKYELLTSSLEKIVKFYSFSL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHH
VDKPFARGVPNSIDVFSRAIIGVAFGLGFVGTMLIDYFIISKVAYIVKQKIKQSKKVGM
HCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11048724 [H]