Definition Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome.
Accession NC_002162
Length 751,719

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Identifier: 13357721

GI number: 13357721

Start: 199977

End: 201164

Strand: Reverse

Name: Not Available

Synonym: UU164

Alternate gene names: NA

Gene position: 201164-199977 (Counterclockwise)

Preceding gene: 13357722

Following gene: 13357720

Centisome position: 26.76

GC content: 30.22

Gene sequence:

>1188_bases
ATGGCTGATAACCAAAACACTTGAAAAAGACCAGATCCAAATGCTAAATATACAATCACTCAATATTTAGATGTTGTTAA
CGCTAATAATGAACGTGTTGTTGCAGGTGGATTTGAAAAATATATGCTAGAAAATCAATTTAACGCTGAATTTCTAGGAA
GTGCAACAATGACACCAACTAAAATTATGGATGATATGCGAACTGCTATTTATGAAGTTGGCGTAATCGGACAAGTTGAA
GAGTACCGTGATGACTTTACACAAAAGCAAGTACCAGCAATTGATAGATTAACATTACATTTAAGTAATGACTATCAAAA
AGAAGTAAGTATTAGTGTATTTGATAAAAAAACAGGTGCTCAATGAAACGATTTTTTAGCTAAGACATTAGCAAATTTAG
AAGTCGTTAAACAAGATCAAATTAATTTAATTAACATTGATGCGATTTATCAATCTTGTTTAGCAACTGGTAATTATATT
ATTATTCCAGAACTTAGTCCTGATCGTGTTGAATCATTAACAGATGATGAACGATTAAAAATTGTTGAAAAAATATATCG
TAAAGCAAAACAAGTAACAAAAAGTCGTACTAAATTTAATTTAGGAGCTGATCCAAATAAATTACGATTCGTTTTATCAG
ATGATGCAGCATTAGTTGTATTAACTGCTAAAACTTATAAAATTCGTGATGGTCAAGCATACAGCGACTATAGCACTAAG
GGTTTAGGAAGTAGTTCACAATATATGGGTGATTATTTAGGAATGCCAATATACTCATCTGCATATTTAGGCGAAGATTA
TTTAAAATCAACAGATCAAAAATACACAAGTAATTTAATTCGTGATTACAAGTTTAGCAAACTAAGCGGTATTATTACAA
TGCCTGAGACTACAATTTGTTTAAAACAAGAATTAATGTTAACAACATTTCAAAGTCCAACAAGCAAATCACACCAGTTA
ATTCATAACTCATGAAGTATGAACAGTGCGGTCTTTCCACAATTTGCACATTTAAATTTTGTGATTTTAAATGATAAACC
AACAAAAGATGAAATCAATAAAGCACGCTCAAATCTTTATTCACAATTTCCCTCACTATATGCTGAATTTAAAACACCAA
TCAGTGAAGATTCTAAAATCACTGAAGTAAATAAAGCAAATTGAAGGGGTTTAAGTACTTACAAGTAA

Upstream 100 bases:

>100_bases
ACAAAATCAACAGTTTGTTAATATTCATCAAGAAAAACCAGTCGTAGAAGATGCTAATAGCCACTTTTTAAAATTTTTTA
ACTAATGGAGAATTGAAAAA

Downstream 100 bases:

>100_bases
TTTTACAAAGAAAGGAGAAAGGGCAAATAATGCCCTTTTTTTGTTAACTAATACTATGGGTATACTAATTCTAATACTAC
GCTTTGTTGGTCGCTTGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 395; Mature: 394

Protein sequence:

>395_residues
MADNQNTWKRPDPNAKYTITQYLDVVNANNERVVAGGFEKYMLENQFNAEFLGSATMTPTKIMDDMRTAIYEVGVIGQVE
EYRDDFTQKQVPAIDRLTLHLSNDYQKEVSISVFDKKTGAQWNDFLAKTLANLEVVKQDQINLINIDAIYQSCLATGNYI
IIPELSPDRVESLTDDERLKIVEKIYRKAKQVTKSRTKFNLGADPNKLRFVLSDDAALVVLTAKTYKIRDGQAYSDYSTK
GLGSSSQYMGDYLGMPIYSSAYLGEDYLKSTDQKYTSNLIRDYKFSKLSGIITMPETTICLKQELMLTTFQSPTSKSHQL
IHNSWSMNSAVFPQFAHLNFVILNDKPTKDEINKARSNLYSQFPSLYAEFKTPISEDSKITEVNKANWRGLSTYK

Sequences:

>Translated_395_residues
MADNQNT*KRPDPNAKYTITQYLDVVNANNERVVAGGFEKYMLENQFNAEFLGSATMTPTKIMDDMRTAIYEVGVIGQVE
EYRDDFTQKQVPAIDRLTLHLSNDYQKEVSISVFDKKTGAQ*NDFLAKTLANLEVVKQDQINLINIDAIYQSCLATGNYI
IIPELSPDRVESLTDDERLKIVEKIYRKAKQVTKSRTKFNLGADPNKLRFVLSDDAALVVLTAKTYKIRDGQAYSDYSTK
GLGSSSQYMGDYLGMPIYSSAYLGEDYLKSTDQKYTSNLIRDYKFSKLSGIITMPETTICLKQELMLTTFQSPTSKSHQL
IHNS*SMNSAVFPQFAHLNFVILNDKPTKDEINKARSNLYSQFPSLYAEFKTPISEDSKITEVNKAN*RGLSTYK
>Mature_394_residues
ADNQNT*KRPDPNAKYTITQYLDVVNANNERVVAGGFEKYMLENQFNAEFLGSATMTPTKIMDDMRTAIYEVGVIGQVEE
YRDDFTQKQVPAIDRLTLHLSNDYQKEVSISVFDKKTGAQ*NDFLAKTLANLEVVKQDQINLINIDAIYQSCLATGNYII
IPELSPDRVESLTDDERLKIVEKIYRKAKQVTKSRTKFNLGADPNKLRFVLSDDAALVVLTAKTYKIRDGQAYSDYSTKG
LGSSSQYMGDYLGMPIYSSAYLGEDYLKSTDQKYTSNLIRDYKFSKLSGIITMPETTICLKQELMLTTFQSPTSKSHQLI
HNS*SMNSAVFPQFAHLNFVILNDKPTKDEINKARSNLYSQFPSLYAEFKTPISEDSKITEVNKAN*RGLSTYK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44187; Mature: 44056

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADNQNTKRPDPNAKYTITQYLDVVNANNERVVAGGFEKYMLENQFNAEFLGSATMTPTK
CCCCCCCCCCCCCCCEEHHHHHHHHCCCCCEEEECCHHHHHHHCCCCCHHCCCCCCCHHH
IMDDMRTAIYEVGVIGQVEEYRDDFTQKQVPAIDRLTLHLSNDYQKEVSISVFDKKTGAQ
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEECCCCCC
NDFLAKTLANLEVVKQDQINLINIDAIYQSCLATGNYIIIPELSPDRVESLTDDERLKIV
HHHHHHHHHHHHHEECCCCCEEEHHHHHHHHHHCCCEEEEECCCHHHHHHCCCHHHHHHH
EKIYRKAKQVTKSRTKFNLGADPNKLRFVLSDDAALVVLTAKTYKIRDGQAYSDYSTKGL
HHHHHHHHHHHHHHHEEECCCCCCCEEEEEECCCEEEEEEEEEEEECCCCCCCCCCCCCC
GSSSQYMGDYLGMPIYSSAYLGEDYLKSTDQKYTSNLIRDYKFSKLSGIITMPETTICLK
CCCHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHCCHHHHCCEEECCCHHHHHH
QELMLTTFQSPTSKSHQLIHNSSMNSAVFPQFAHLNFVILNDKPTKDEINKARSNLYSQF
HHHHHHHCCCCCCCCHHHHHCCCCCCCCCCEECCEEEEEECCCCCHHHHHHHHHHHHHHH
PSLYAEFKTPISEDSKITEVNKANRGLSTYK
HHHHHHHCCCCCCCCCCHHHHHHCCCCCCCC
>Mature Secondary Structure 
ADNQNTKRPDPNAKYTITQYLDVVNANNERVVAGGFEKYMLENQFNAEFLGSATMTPTK
CCCCCCCCCCCCCCEEHHHHHHHHCCCCCEEEECCHHHHHHHCCCCCHHCCCCCCCHHH
IMDDMRTAIYEVGVIGQVEEYRDDFTQKQVPAIDRLTLHLSNDYQKEVSISVFDKKTGAQ
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEECCCCCC
NDFLAKTLANLEVVKQDQINLINIDAIYQSCLATGNYIIIPELSPDRVESLTDDERLKIV
HHHHHHHHHHHHHEECCCCCEEEHHHHHHHHHHCCCEEEEECCCHHHHHHCCCHHHHHHH
EKIYRKAKQVTKSRTKFNLGADPNKLRFVLSDDAALVVLTAKTYKIRDGQAYSDYSTKGL
HHHHHHHHHHHHHHHEEECCCCCCCEEEEEECCCEEEEEEEEEEEECCCCCCCCCCCCCC
GSSSQYMGDYLGMPIYSSAYLGEDYLKSTDQKYTSNLIRDYKFSKLSGIITMPETTICLK
CCCHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHCCHHHHCCEEECCCHHHHHH
QELMLTTFQSPTSKSHQLIHNSSMNSAVFPQFAHLNFVILNDKPTKDEINKARSNLYSQF
HHHHHHHCCCCCCCCHHHHHCCCCCCCCCCEECCEEEEEECCCCCHHHHHHHHHHHHHHH
PSLYAEFKTPISEDSKITEVNKANRGLSTYK
HHHHHHHCCCCCCCCCCHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11048724 [H]