| Definition | Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome. |
|---|---|
| Accession | NC_002162 |
| Length | 751,719 |
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Identifier: 13357721
GI number: 13357721
Start: 199977
End: 201164
Strand: Reverse
Name: Not Available
Synonym: UU164
Alternate gene names: NA
Gene position: 201164-199977 (Counterclockwise)
Preceding gene: 13357722
Following gene: 13357720
Centisome position: 26.76
GC content: 30.22
Gene sequence:
>1188_bases ATGGCTGATAACCAAAACACTTGAAAAAGACCAGATCCAAATGCTAAATATACAATCACTCAATATTTAGATGTTGTTAA CGCTAATAATGAACGTGTTGTTGCAGGTGGATTTGAAAAATATATGCTAGAAAATCAATTTAACGCTGAATTTCTAGGAA GTGCAACAATGACACCAACTAAAATTATGGATGATATGCGAACTGCTATTTATGAAGTTGGCGTAATCGGACAAGTTGAA GAGTACCGTGATGACTTTACACAAAAGCAAGTACCAGCAATTGATAGATTAACATTACATTTAAGTAATGACTATCAAAA AGAAGTAAGTATTAGTGTATTTGATAAAAAAACAGGTGCTCAATGAAACGATTTTTTAGCTAAGACATTAGCAAATTTAG AAGTCGTTAAACAAGATCAAATTAATTTAATTAACATTGATGCGATTTATCAATCTTGTTTAGCAACTGGTAATTATATT ATTATTCCAGAACTTAGTCCTGATCGTGTTGAATCATTAACAGATGATGAACGATTAAAAATTGTTGAAAAAATATATCG TAAAGCAAAACAAGTAACAAAAAGTCGTACTAAATTTAATTTAGGAGCTGATCCAAATAAATTACGATTCGTTTTATCAG ATGATGCAGCATTAGTTGTATTAACTGCTAAAACTTATAAAATTCGTGATGGTCAAGCATACAGCGACTATAGCACTAAG GGTTTAGGAAGTAGTTCACAATATATGGGTGATTATTTAGGAATGCCAATATACTCATCTGCATATTTAGGCGAAGATTA TTTAAAATCAACAGATCAAAAATACACAAGTAATTTAATTCGTGATTACAAGTTTAGCAAACTAAGCGGTATTATTACAA TGCCTGAGACTACAATTTGTTTAAAACAAGAATTAATGTTAACAACATTTCAAAGTCCAACAAGCAAATCACACCAGTTA ATTCATAACTCATGAAGTATGAACAGTGCGGTCTTTCCACAATTTGCACATTTAAATTTTGTGATTTTAAATGATAAACC AACAAAAGATGAAATCAATAAAGCACGCTCAAATCTTTATTCACAATTTCCCTCACTATATGCTGAATTTAAAACACCAA TCAGTGAAGATTCTAAAATCACTGAAGTAAATAAAGCAAATTGAAGGGGTTTAAGTACTTACAAGTAA
Upstream 100 bases:
>100_bases ACAAAATCAACAGTTTGTTAATATTCATCAAGAAAAACCAGTCGTAGAAGATGCTAATAGCCACTTTTTAAAATTTTTTA ACTAATGGAGAATTGAAAAA
Downstream 100 bases:
>100_bases TTTTACAAAGAAAGGAGAAAGGGCAAATAATGCCCTTTTTTTGTTAACTAATACTATGGGTATACTAATTCTAATACTAC GCTTTGTTGGTCGCTTGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 395; Mature: 394
Protein sequence:
>395_residues MADNQNTWKRPDPNAKYTITQYLDVVNANNERVVAGGFEKYMLENQFNAEFLGSATMTPTKIMDDMRTAIYEVGVIGQVE EYRDDFTQKQVPAIDRLTLHLSNDYQKEVSISVFDKKTGAQWNDFLAKTLANLEVVKQDQINLINIDAIYQSCLATGNYI IIPELSPDRVESLTDDERLKIVEKIYRKAKQVTKSRTKFNLGADPNKLRFVLSDDAALVVLTAKTYKIRDGQAYSDYSTK GLGSSSQYMGDYLGMPIYSSAYLGEDYLKSTDQKYTSNLIRDYKFSKLSGIITMPETTICLKQELMLTTFQSPTSKSHQL IHNSWSMNSAVFPQFAHLNFVILNDKPTKDEINKARSNLYSQFPSLYAEFKTPISEDSKITEVNKANWRGLSTYK
Sequences:
>Translated_395_residues MADNQNT*KRPDPNAKYTITQYLDVVNANNERVVAGGFEKYMLENQFNAEFLGSATMTPTKIMDDMRTAIYEVGVIGQVE EYRDDFTQKQVPAIDRLTLHLSNDYQKEVSISVFDKKTGAQ*NDFLAKTLANLEVVKQDQINLINIDAIYQSCLATGNYI IIPELSPDRVESLTDDERLKIVEKIYRKAKQVTKSRTKFNLGADPNKLRFVLSDDAALVVLTAKTYKIRDGQAYSDYSTK GLGSSSQYMGDYLGMPIYSSAYLGEDYLKSTDQKYTSNLIRDYKFSKLSGIITMPETTICLKQELMLTTFQSPTSKSHQL IHNS*SMNSAVFPQFAHLNFVILNDKPTKDEINKARSNLYSQFPSLYAEFKTPISEDSKITEVNKAN*RGLSTYK >Mature_394_residues ADNQNT*KRPDPNAKYTITQYLDVVNANNERVVAGGFEKYMLENQFNAEFLGSATMTPTKIMDDMRTAIYEVGVIGQVEE YRDDFTQKQVPAIDRLTLHLSNDYQKEVSISVFDKKTGAQ*NDFLAKTLANLEVVKQDQINLINIDAIYQSCLATGNYII IPELSPDRVESLTDDERLKIVEKIYRKAKQVTKSRTKFNLGADPNKLRFVLSDDAALVVLTAKTYKIRDGQAYSDYSTKG LGSSSQYMGDYLGMPIYSSAYLGEDYLKSTDQKYTSNLIRDYKFSKLSGIITMPETTICLKQELMLTTFQSPTSKSHQLI HNS*SMNSAVFPQFAHLNFVILNDKPTKDEINKARSNLYSQFPSLYAEFKTPISEDSKITEVNKAN*RGLSTYK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44187; Mature: 44056
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADNQNTKRPDPNAKYTITQYLDVVNANNERVVAGGFEKYMLENQFNAEFLGSATMTPTK CCCCCCCCCCCCCCCEEHHHHHHHHCCCCCEEEECCHHHHHHHCCCCCHHCCCCCCCHHH IMDDMRTAIYEVGVIGQVEEYRDDFTQKQVPAIDRLTLHLSNDYQKEVSISVFDKKTGAQ HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEECCCCCC NDFLAKTLANLEVVKQDQINLINIDAIYQSCLATGNYIIIPELSPDRVESLTDDERLKIV HHHHHHHHHHHHHEECCCCCEEEHHHHHHHHHHCCCEEEEECCCHHHHHHCCCHHHHHHH EKIYRKAKQVTKSRTKFNLGADPNKLRFVLSDDAALVVLTAKTYKIRDGQAYSDYSTKGL HHHHHHHHHHHHHHHEEECCCCCCCEEEEEECCCEEEEEEEEEEEECCCCCCCCCCCCCC GSSSQYMGDYLGMPIYSSAYLGEDYLKSTDQKYTSNLIRDYKFSKLSGIITMPETTICLK CCCHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHCCHHHHCCEEECCCHHHHHH QELMLTTFQSPTSKSHQLIHNSSMNSAVFPQFAHLNFVILNDKPTKDEINKARSNLYSQF HHHHHHHCCCCCCCCHHHHHCCCCCCCCCCEECCEEEEEECCCCCHHHHHHHHHHHHHHH PSLYAEFKTPISEDSKITEVNKANRGLSTYK HHHHHHHCCCCCCCCCCHHHHHHCCCCCCCC >Mature Secondary Structure ADNQNTKRPDPNAKYTITQYLDVVNANNERVVAGGFEKYMLENQFNAEFLGSATMTPTK CCCCCCCCCCCCCCEEHHHHHHHHCCCCCEEEECCHHHHHHHCCCCCHHCCCCCCCHHH IMDDMRTAIYEVGVIGQVEEYRDDFTQKQVPAIDRLTLHLSNDYQKEVSISVFDKKTGAQ HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEECCCCCC NDFLAKTLANLEVVKQDQINLINIDAIYQSCLATGNYIIIPELSPDRVESLTDDERLKIV HHHHHHHHHHHHHEECCCCCEEEHHHHHHHHHHCCCEEEEECCCHHHHHHCCCHHHHHHH EKIYRKAKQVTKSRTKFNLGADPNKLRFVLSDDAALVVLTAKTYKIRDGQAYSDYSTKGL HHHHHHHHHHHHHHHEEECCCCCCCEEEEEECCCEEEEEEEEEEEECCCCCCCCCCCCCC GSSSQYMGDYLGMPIYSSAYLGEDYLKSTDQKYTSNLIRDYKFSKLSGIITMPETTICLK CCCHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHCCHHHHCCEEECCCHHHHHH QELMLTTFQSPTSKSHQLIHNSSMNSAVFPQFAHLNFVILNDKPTKDEINKARSNLYSQF HHHHHHHCCCCCCCCHHHHHCCCCCCCCCCEECCEEEEEECCCCCHHHHHHHHHHHHHHH PSLYAEFKTPISEDSKITEVNKANRGLSTYK HHHHHHHCCCCCCCCCCHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11048724 [H]