| Definition | Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome. |
|---|---|
| Accession | NC_002162 |
| Length | 751,719 |
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Identifier: 13357719
GI number: 13357719
Start: 197766
End: 199139
Strand: Reverse
Name: Not Available
Synonym: UU162
Alternate gene names: NA
Gene position: 199139-197766 (Counterclockwise)
Preceding gene: 13357720
Following gene: 13357718
Centisome position: 26.49
GC content: 26.86
Gene sequence:
>1374_bases ATGAATAATAGATTATTACTTAGTGTAGAAGAATATTTAAGTTTGTTTCCACTAATTGTACGAAACGAAAATTTAGAAGA TAACCAATTACAATTAGAACGTAAAAAACAAGCGTTAACTACGTTTATTTTGCGTGCTCAATCAATGATTGATGATTGTG TAGCATCAAATGGTGGTGCTGGTTTTATTTATAGTTGATTTGATGATTTAAAAACAACAGATTATCAAAAAACTAAATTT AAAGAAGCAATTGCAACATTAACAAATTATTTATGATTACAAGGTCATTTTATCGATAAAGATTATACATCTGCTATTGG TGATGGCTTATCATTATCTTTTAAATCTGAAAATGCTGATTTTGAAAAAAAGCGATTAGATATCATTAATAAATTACGTG TTTGTGGATTATATAAAAAATCAAAGTTTGCTAACTTTAACGATGATGGTATTTATGTTAATTATGATGAATTAAAAATT AATGCGATTAATAATGTTCATGAAGAATTAAGAGACCATTATATATCTAAAAATAACCCTGTTGTTAATAATAATTTTGA TTTAAACCATCACAATATTAATAACGTAAGTAGCATTAACGCATCTGGTAATTTAGCAACATTAAATGGCTTTATTTTAA ATGATTGTACACTACCAAATGATTTAACAACAGATAAAAGCAATAAAGTTTATGATAATGCTATTGCTAATTATGTTGAT ATTCATGACGTTAAAAATTTAGCATGATATGGACAAAATAATAACAATGCAATTACACGCCAAGAATTGTATGAATATTG TAATAAAATTAATTCCAAAATGTACTGGGATGCTATTTATGACTATAAAGCTGGTGAGTTAGTTTATGACTTAGATGAAA AAACTAACACAATTAAAGTTTATAAGGCACTAGTTAACAATGGTGTAAGTACGCATAATATCGTAGATCCAAGTAAGCAA ATTAACGAAAATGTATGAGAATTAATTAATATTCAACAAATTGATTTAAACAAAATTAAAGAAGGCGTGCAAGATGCTGT TGATAATAAAGTAAACGAAGTTAAAAAAGCAATTGATACTAAAGAAAATACATTCACTAAAAACTTAGAAAATAAAGTTA ATGAAGCCAAACAAGCGGTTTTATCATCTTATGAGCAAGATAAAGCATCTGGTGTATTTAAAGGTGAAAAAGGCGAACCT GGAATACAAGGTCCAATTGGTCCAAAAGGTGAAACTGGTCCAAAGGGTGAAAAAGGTGATAGTGCTAATGTTGATGCTTT AACATCTAATTTAGAAAGTTTTAAAAACACTGCACTAAATAGGAATGTTAGGTTTCCGTGAAAAATTATGGATAACTTAA ATAAAATAATTTAA
Upstream 100 bases:
>100_bases ACATATTTTACCATGCTAATCGTAAAAACTTAATTCACTTACAAAAAGAAAGTATTTACTGATTTGATGCATCTCGTAAA TATTTTGAAGGAGTTAAATA
Downstream 100 bases:
>100_bases TTAATGACGTATCTGCTGGTAATAGAGAGGTTCTGATACAGTTGCCTTTTGGCACTGTAAACTAGACGATTAGATTGAAA CACTGATAACTTGAAATGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 457; Mature: 457
Protein sequence:
>457_residues MNNRLLLSVEEYLSLFPLIVRNENLEDNQLQLERKKQALTTFILRAQSMIDDCVASNGGAGFIYSWFDDLKTTDYQKTKF KEAIATLTNYLWLQGHFIDKDYTSAIGDGLSLSFKSENADFEKKRLDIINKLRVCGLYKKSKFANFNDDGIYVNYDELKI NAINNVHEELRDHYISKNNPVVNNNFDLNHHNINNVSSINASGNLATLNGFILNDCTLPNDLTTDKSNKVYDNAIANYVD IHDVKNLAWYGQNNNNAITRQELYEYCNKINSKMYWDAIYDYKAGELVYDLDEKTNTIKVYKALVNNGVSTHNIVDPSKQ INENVWELINIQQIDLNKIKEGVQDAVDNKVNEVKKAIDTKENTFTKNLENKVNEAKQAVLSSYEQDKASGVFKGEKGEP GIQGPIGPKGETGPKGEKGDSANVDALTSNLESFKNTALNRNVRFPWKIMDNLNKII
Sequences:
>Translated_457_residues MNNRLLLSVEEYLSLFPLIVRNENLEDNQLQLERKKQALTTFILRAQSMIDDCVASNGGAGFIYS*FDDLKTTDYQKTKF KEAIATLTNYL*LQGHFIDKDYTSAIGDGLSLSFKSENADFEKKRLDIINKLRVCGLYKKSKFANFNDDGIYVNYDELKI NAINNVHEELRDHYISKNNPVVNNNFDLNHHNINNVSSINASGNLATLNGFILNDCTLPNDLTTDKSNKVYDNAIANYVD IHDVKNLA*YGQNNNNAITRQELYEYCNKINSKMYWDAIYDYKAGELVYDLDEKTNTIKVYKALVNNGVSTHNIVDPSKQ INENV*ELINIQQIDLNKIKEGVQDAVDNKVNEVKKAIDTKENTFTKNLENKVNEAKQAVLSSYEQDKASGVFKGEKGEP GIQGPIGPKGETGPKGEKGDSANVDALTSNLESFKNTALNRNVRFP*KIMDNLNKII >Mature_457_residues MNNRLLLSVEEYLSLFPLIVRNENLEDNQLQLERKKQALTTFILRAQSMIDDCVASNGGAGFIYS*FDDLKTTDYQKTKF KEAIATLTNYL*LQGHFIDKDYTSAIGDGLSLSFKSENADFEKKRLDIINKLRVCGLYKKSKFANFNDDGIYVNYDELKI NAINNVHEELRDHYISKNNPVVNNNFDLNHHNINNVSSINASGNLATLNGFILNDCTLPNDLTTDKSNKVYDNAIANYVD IHDVKNLA*YGQNNNNAITRQELYEYCNKINSKMYWDAIYDYKAGELVYDLDEKTNTIKVYKALVNNGVSTHNIVDPSKQ INENV*ELINIQQIDLNKIKEGVQDAVDNKVNEVKKAIDTKENTFTKNLENKVNEAKQAVLSSYEQDKASGVFKGEKGEP GIQGPIGPKGETGPKGEKGDSANVDALTSNLESFKNTALNRNVRFP*KIMDNLNKII
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50884; Mature: 50884
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNRLLLSVEEYLSLFPLIVRNENLEDNQLQLERKKQALTTFILRAQSMIDDCVASNGGA CCCCEEEEHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GFIYSFDDLKTTDYQKTKFKEAIATLTNYLLQGHFIDKDYTSAIGDGLSLSFKSENADFE EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEEEECCCCCHH KKRLDIINKLRVCGLYKKSKFANFNDDGIYVNYDELKINAINNVHEELRDHYISKNNPVV HHHHHHHHHHHHHCCHHHCCCCCCCCCCEEEEECCEEEEHHHHHHHHHHHHHCCCCCCEE NNNFDLNHHNINNVSSINASGNLATLNGFILNDCTLPNDLTTDKSNKVYDNAIANYVDIH CCCCCCCCCCCCCCCCCCCCCCEEEECCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHH DVKNLAYGQNNNNAITRQELYEYCNKINSKMYWDAIYDYKAGELVYDLDEKTNTIKVYKA HHHHHHCCCCCCCCCCHHHHHHHHHHHCCCEEEHHHHCCCCCCEEEECCCCCCHHHHHHH LVNNGVSTHNIVDPSKQINENVELINIQQIDLNKIKEGVQDAVDNKVNEVKKAIDTKENT HHHCCCCCCCCCCCHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCHHH FTKNLENKVNEAKQAVLSSYEQDKASGVFKGEKGEPGIQGPIGPKGETGPKGEKGDSANV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH DALTSNLESFKNTALNRNVRFPKIMDNLNKII HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCC >Mature Secondary Structure MNNRLLLSVEEYLSLFPLIVRNENLEDNQLQLERKKQALTTFILRAQSMIDDCVASNGGA CCCCEEEEHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GFIYSFDDLKTTDYQKTKFKEAIATLTNYLLQGHFIDKDYTSAIGDGLSLSFKSENADFE EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEEEECCCCCHH KKRLDIINKLRVCGLYKKSKFANFNDDGIYVNYDELKINAINNVHEELRDHYISKNNPVV HHHHHHHHHHHHHCCHHHCCCCCCCCCCEEEEECCEEEEHHHHHHHHHHHHHCCCCCCEE NNNFDLNHHNINNVSSINASGNLATLNGFILNDCTLPNDLTTDKSNKVYDNAIANYVDIH CCCCCCCCCCCCCCCCCCCCCCEEEECCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHH DVKNLAYGQNNNNAITRQELYEYCNKINSKMYWDAIYDYKAGELVYDLDEKTNTIKVYKA HHHHHHCCCCCCCCCCHHHHHHHHHHHCCCEEEHHHHCCCCCCEEEECCCCCCHHHHHHH LVNNGVSTHNIVDPSKQINENVELINIQQIDLNKIKEGVQDAVDNKVNEVKKAIDTKENT HHHCCCCCCCCCCCHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCHHH FTKNLENKVNEAKQAVLSSYEQDKASGVFKGEKGEPGIQGPIGPKGETGPKGEKGDSANV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH DALTSNLESFKNTALNRNVRFPKIMDNLNKII HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11048724 [H]