| Definition | Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome. |
|---|---|
| Accession | NC_002162 |
| Length | 751,719 |
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Identifier: 13357716
GI number: 13357716
Start: 195915
End: 196463
Strand: Reverse
Name: Not Available
Synonym: UU159
Alternate gene names: NA
Gene position: 196463-195915 (Counterclockwise)
Preceding gene: 13357717
Following gene: 13357715
Centisome position: 26.14
GC content: 26.41
Gene sequence:
>549_bases ATGATGAACAATAAAAATAAGTTTAAAAACAAAGAATGGAAGTTTTCTAAAAAACAAGTACAGCTGATTTATTTAACAAG TTCAATTATTTCAGGGTTATTTTTAGGATTAGCTTTATTATCTACTTATTTAATTGCTGGACTACCAAATGATAACGCAT TTGTGTTATTTGTAAAAGAACAAAAGTTTTATTTTCCATTCTTTATGACTATTGGATTTATTAATTTAATTATTTCAATG TTAACACTTTTACCAACATTAAAAACATTATGGCGAACTGTTGCTAAAATGCACCAGTACGGGGATTTAAGTAAAGAAGA GTTCGAAGCCTTAGATATACTAGTTGAACAAATACGTAATCGTTATATTAGTGTTGAAAATATTAAAGCAGTTATAAGTT CTAACAATTACAAAACATTGGATGAAGAATTAAAAAAACTAGAACAACAAGAAAAGCAATTAAAAATACAAGAGCAAGAA CAAAAAGTTAAGCGATTAGAACAGGAGATTATAAAAGATGACAAAACAAGAGTTCAAAGCGATTACTAA
Upstream 100 bases:
>100_bases GACAAACTAAAAAGTGAATGAAAAGCTATTAACGAACAAAAAAGAAGCATAAAAAAGGCTCAAAATGATTTATACAAGCA AAATAAGGAGAGTATTTTAA
Downstream 100 bases:
>100_bases GGAATTATTTTTCTTTAATAAAAAACGCTTGATGTTATGAATTGCTATTTTAATATTTGTAATTGCGTTTGCTATGATTA TTGTGTTTGTACCATTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MMNNKNKFKNKEWKFSKKQVQLIYLTSSIISGLFLGLALLSTYLIAGLPNDNAFVLFVKEQKFYFPFFMTIGFINLIISM LTLLPTLKTLWRTVAKMHQYGDLSKEEFEALDILVEQIRNRYISVENIKAVISSNNYKTLDEELKKLEQQEKQLKIQEQE QKVKRLEQEIIKDDKTRVQSDY
Sequences:
>Translated_182_residues MMNNKNKFKNKEWKFSKKQVQLIYLTSSIISGLFLGLALLSTYLIAGLPNDNAFVLFVKEQKFYFPFFMTIGFINLIISM LTLLPTLKTLWRTVAKMHQYGDLSKEEFEALDILVEQIRNRYISVENIKAVISSNNYKTLDEELKKLEQQEKQLKIQEQE QKVKRLEQEIIKDDKTRVQSDY >Mature_182_residues MMNNKNKFKNKEWKFSKKQVQLIYLTSSIISGLFLGLALLSTYLIAGLPNDNAFVLFVKEQKFYFPFFMTIGFINLIISM LTLLPTLKTLWRTVAKMHQYGDLSKEEFEALDILVEQIRNRYISVENIKAVISSNNYKTLDEELKKLEQQEKQLKIQEQE QKVKRLEQEIIKDDKTRVQSDY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y159_UREPA (Q9PQY5)
Other databases:
- EMBL: AF222894 - RefSeq: NP_077990.1 - GeneID: 876412 - GenomeReviews: AF222894_GR - KEGG: uur:UU159 - HOGENOM: HBG734259 - OMA: MTIGFIN - ProtClustDB: CLSK2298801 - BioCyc: UURE95667:UU159-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21498; Mature: 21498
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xb354cd4)-; HASH(0xadfbb10)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMNNKNKFKNKEWKFSKKQVQLIYLTSSIISGLFLGLALLSTYLIAGLPNDNAFVLFVKE CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEC QKFYFPFFMTIGFINLIISMLTLLPTLKTLWRTVAKMHQYGDLSKEEFEALDILVEQIRN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH RYISVENIKAVISSNNYKTLDEELKKLEQQEKQLKIQEQEQKVKRLEQEIIKDDKTRVQS HCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DY CH >Mature Secondary Structure MMNNKNKFKNKEWKFSKKQVQLIYLTSSIISGLFLGLALLSTYLIAGLPNDNAFVLFVKE CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEC QKFYFPFFMTIGFINLIISMLTLLPTLKTLWRTVAKMHQYGDLSKEEFEALDILVEQIRN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH RYISVENIKAVISSNNYKTLDEELKKLEQQEKQLKIQEQEQKVKRLEQEIIKDDKTRVQS HCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DY CH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11048724