Definition Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome.
Accession NC_002162
Length 751,719

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Identifier: 13357711

GI number: 13357711

Start: 192154

End: 192810

Strand: Direct

Name: Not Available

Synonym: UU154

Alternate gene names: NA

Gene position: 192154-192810 (Clockwise)

Preceding gene: 13357710

Following gene: 13357712

Centisome position: 25.56

GC content: 32.88

Gene sequence:

>657_bases
ATGGTTAAAGACGATAAATTAGTGCCAAGCATTAGATTATTAACACCAAATGAACTAAGCGAACAATGAGCTAATCCAAA
TAGCGAAATTAATCAAATCACACGTGCTGTTTTGACCATTCAAGGAATTGATTTAAAAGCCATTGATTTAAACCAAGCAG
CACAAATTATTTATTTTTGCCAAGCAAATAATTTAAATCCACTAAACAAAGAAGTTTATTTAATTCAAATGGGCAATCGT
TTAGCACCAATTGTTGGTATTCATACTATGACAGAACGTGCTTATAGAACTGAACGATTAGTTGGTATTGTACAAAGTTA
TAACGATGTTAACAAAAGTGCTAAGACAATACTAACAATCAGATCGCCAGGTTTAAAAGGTCTTGGAACTGTTGAAGCTG
AAGTATTTTTAAGCGAATACAGCACGAATAAAAACTTGTGATTAACAAAACCTATTACCATGTTAAAAAAGGTGTCTTTG
GCCCACGCATTGCGTTTAAGTGGCTTATTAGCGTTTAAAGGTGATACGCCTTATATTTATGAAGAAATGCAACAAGGCGA
AGCAGTGCCAAATAAAAAAATGTTTACACCACCAGTTGCTGAAGTAATTGAACCAGCAGTTGAAAATATAAAGAAAGTAG
ATTTTAATGAGTTCTAA

Upstream 100 bases:

>100_bases
ACAAAATCATTACTGATTATAAAGTTGATACAAAAAAATATGAAACGATTAAAAAAGGAACAACATCAACACGAATAACA
TGAAGTGGAGCAGATAAATA

Downstream 100 bases:

>100_bases
TAACTTTGATAATAATATGCCACGTATTGAATTTAAAAAAATGCCACTAACTTTTATTAGATTAAATACGAAAAAAAGTA
ATAACGCACCCTTTGTTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MVKDDKLVPSIRLLTPNELSEQWANPNSEINQITRAVLTIQGIDLKAIDLNQAAQIIYFCQANNLNPLNKEVYLIQMGNR
LAPIVGIHTMTERAYRTERLVGIVQSYNDVNKSAKTILTIRSPGLKGLGTVEAEVFLSEYSTNKNLWLTKPITMLKKVSL
AHALRLSGLLAFKGDTPYIYEEMQQGEAVPNKKMFTPPVAEVIEPAVENIKKVDFNEF

Sequences:

>Translated_218_residues
MVKDDKLVPSIRLLTPNELSEQ*ANPNSEINQITRAVLTIQGIDLKAIDLNQAAQIIYFCQANNLNPLNKEVYLIQMGNR
LAPIVGIHTMTERAYRTERLVGIVQSYNDVNKSAKTILTIRSPGLKGLGTVEAEVFLSEYSTNKNL*LTKPITMLKKVSL
AHALRLSGLLAFKGDTPYIYEEMQQGEAVPNKKMFTPPVAEVIEPAVENIKKVDFNEF
>Mature_218_residues
MVKDDKLVPSIRLLTPNELSEQ*ANPNSEINQITRAVLTIQGIDLKAIDLNQAAQIIYFCQANNLNPLNKEVYLIQMGNR
LAPIVGIHTMTERAYRTERLVGIVQSYNDVNKSAKTILTIRSPGLKGLGTVEAEVFLSEYSTNKNL*LTKPITMLKKVSL
AHALRLSGLLAFKGDTPYIYEEMQQGEAVPNKKMFTPPVAEVIEPAVENIKKVDFNEF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010183
- InterPro:   IPR018330 [H]

Pfam domain/function: PF03837 RecT [H]

EC number: NA

Molecular weight: Translated: 24063; Mature: 24063

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKDDKLVPSIRLLTPNELSEQANPNSEINQITRAVLTIQGIDLKAIDLNQAAQIIYFCQ
CCCCCCCCCEEEEECCHHHHHCCCCCHHHHHHHHHHHEECCCCEEEECCCCCEEEEEEEE
ANNLNPLNKEVYLIQMGNRLAPIVGIHTMTERAYRTERLVGIVQSYNDVNKSAKTILTIR
CCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE
SPGLKGLGTVEAEVFLSEYSTNKNLLTKPITMLKKVSLAHALRLSGLLAFKGDTPYIYEE
CCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCHHHHH
MQQGEAVPNKKMFTPPVAEVIEPAVENIKKVDFNEF
HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MVKDDKLVPSIRLLTPNELSEQANPNSEINQITRAVLTIQGIDLKAIDLNQAAQIIYFCQ
CCCCCCCCCEEEEECCHHHHHCCCCCHHHHHHHHHHHEECCCCEEEECCCCCEEEEEEEE
ANNLNPLNKEVYLIQMGNRLAPIVGIHTMTERAYRTERLVGIVQSYNDVNKSAKTILTIR
CCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE
SPGLKGLGTVEAEVFLSEYSTNKNLLTKPITMLKKVSLAHALRLSGLLAFKGDTPYIYEE
CCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCHHHHH
MQQGEAVPNKKMFTPPVAEVIEPAVENIKKVDFNEF
HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11048724 [H]