Definition Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome.
Accession NC_002162
Length 751,719

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Identifier: 13357701

GI number: 13357701

Start: 188298

End: 189029

Strand: Reverse

Name: Not Available

Synonym: UU144

Alternate gene names: NA

Gene position: 189029-188298 (Counterclockwise)

Preceding gene: 13357715

Following gene: 13357700

Centisome position: 25.15

GC content: 22.81

Gene sequence:

>732_bases
TTGTCGCTCCATAAAACCATATACATAAAGTTTAATAATCGTGATTATGATGTTAAATTGACTAATGTTAAAATTGCAAA
TATTGCATTAAATAATGATAATGTTAATAATATTGAACAAAATCATATTTCATTTCGACATCTATCAACCAATGATATTA
AAAATTCTAATGATAAAGTAGAAGCTAAATTTTCAATTGGATTAGGTTTTGATATATCTGAAAAACTAAAAAATATTGCA
TTTAAAAAGTTAGACACTAATACTAATAAATTAATTGATATATCTGATCCAACAATTTTACGTTTAACTTTCTACGAATA
TAATAAAGATCAAAAAGTAGAAAACAATCTTGCTGCACCAACAGATAAAACAAAAATTTCAGTTGTTGAAATTAAAAAAT
CACAATTAATGAATTCATCTATTGTTTCTTTTGTAAAAAAATTAAACAAAAATGCTAAGTATCATATGGCTAATATCGCC
TTTAACCAACAATTATTACCATATTTAAATAAACAATTCAATGTTAATGCTGATTTTCCAATTGATCTAGAGCAAAATCC
AATCGACTTTAATGATAATAAACAAGCCAATGATGAAAAAATTAAAAAGACAAAAGAATCTGCTATAAAAGTAGCTACAG
CAATTGCTAAACAAATTGTTGGAATAGATTATAAAGGAAGAGACATTATTAAAAATTTTATTGAATTAGATAATGTAGTA
AATAAAAAATAA

Upstream 100 bases:

>100_bases
CTTGTACCTTAAACTTTCTTAAATGTGATTCATAAGTTAAATATGTATTTTTTGATAAATTACGTTTTTTAATACTTTGT
AGAAATTTGTTTATCATACT

Downstream 100 bases:

>100_bases
AAACCAAAAAACCTGTAATTATTAATTAATTATGGGCTTTTAATTTTATTTAGAGAAGAAAAAACCAAACCGTTTTGGTT
TGGTTTTTATAATTATAATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 242

Protein sequence:

>243_residues
MSLHKTIYIKFNNRDYDVKLTNVKIANIALNNDNVNNIEQNHISFRHLSTNDIKNSNDKVEAKFSIGLGFDISEKLKNIA
FKKLDTNTNKLIDISDPTILRLTFYEYNKDQKVENNLAAPTDKTKISVVEIKKSQLMNSSIVSFVKKLNKNAKYHMANIA
FNQQLLPYLNKQFNVNADFPIDLEQNPIDFNDNKQANDEKIKKTKESAIKVATAIAKQIVGIDYKGRDIIKNFIELDNVV
NKK

Sequences:

>Translated_243_residues
MSLHKTIYIKFNNRDYDVKLTNVKIANIALNNDNVNNIEQNHISFRHLSTNDIKNSNDKVEAKFSIGLGFDISEKLKNIA
FKKLDTNTNKLIDISDPTILRLTFYEYNKDQKVENNLAAPTDKTKISVVEIKKSQLMNSSIVSFVKKLNKNAKYHMANIA
FNQQLLPYLNKQFNVNADFPIDLEQNPIDFNDNKQANDEKIKKTKESAIKVATAIAKQIVGIDYKGRDIIKNFIELDNVV
NKK
>Mature_242_residues
SLHKTIYIKFNNRDYDVKLTNVKIANIALNNDNVNNIEQNHISFRHLSTNDIKNSNDKVEAKFSIGLGFDISEKLKNIAF
KKLDTNTNKLIDISDPTILRLTFYEYNKDQKVENNLAAPTDKTKISVVEIKKSQLMNSSIVSFVKKLNKNAKYHMANIAF
NQQLLPYLNKQFNVNADFPIDLEQNPIDFNDNKQANDEKIKKTKESAIKVATAIAKQIVGIDYKGRDIIKNFIELDNVVN
KK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y144_UREPA (Q9PR00)

Other databases:

- EMBL:   AF222894
- RefSeq:   NP_077975.1
- GeneID:   875913
- GenomeReviews:   AF222894_GR
- KEGG:   uur:UU144
- HOGENOM:   HBG734255
- OMA:   NKQANDE
- ProtClustDB:   CLSK2298787
- BioCyc:   UURE95667:UU144-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27866; Mature: 27735

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLHKTIYIKFNNRDYDVKLTNVKIANIALNNDNVNNIEQNHISFRHLSTNDIKNSNDKV
CCCCEEEEEEECCCCEEEEEEEEEEEEEEECCCCCCCCHHCCEEEEEECCCCCCCCCCCE
EAKFSIGLGFDISEKLKNIAFKKLDTNTNKLIDISDPTILRLTFYEYNKDQKVENNLAAP
EEEEEEECCCCHHHHHHHHHHHEECCCCCEEEECCCCEEEEEEEEECCCCCCHHCCCCCC
TDKTKISVVEIKKSQLMNSSIVSFVKKLNKNAKYHMANIAFNQQLLPYLNKQFNVNADFP
CCCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHCCCCCCCCCCCC
IDLEQNPIDFNDNKQANDEKIKKTKESAIKVATAIAKQIVGIDYKGRDIIKNFIELDNVV
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
NKK
CCC
>Mature Secondary Structure 
SLHKTIYIKFNNRDYDVKLTNVKIANIALNNDNVNNIEQNHISFRHLSTNDIKNSNDKV
CCCEEEEEEECCCCEEEEEEEEEEEEEEECCCCCCCCHHCCEEEEEECCCCCCCCCCCE
EAKFSIGLGFDISEKLKNIAFKKLDTNTNKLIDISDPTILRLTFYEYNKDQKVENNLAAP
EEEEEEECCCCHHHHHHHHHHHEECCCCCEEEECCCCEEEEEEEEECCCCCCHHCCCCCC
TDKTKISVVEIKKSQLMNSSIVSFVKKLNKNAKYHMANIAFNQQLLPYLNKQFNVNADFP
CCCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHCCCCCCCCCCCC
IDLEQNPIDFNDNKQANDEKIKKTKESAIKVATAIAKQIVGIDYKGRDIIKNFIELDNVV
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
NKK
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11048724