Definition Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome.
Accession NC_002162
Length 751,719

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Identifier: 13357696

GI number: 13357696

Start: 178869

End: 179579

Strand: Direct

Name: Not Available

Synonym: UU139

Alternate gene names: NA

Gene position: 178869-179579 (Clockwise)

Preceding gene: 13357681

Following gene: 13357697

Centisome position: 23.79

GC content: 18.28

Gene sequence:

>711_bases
ATGGATGAACAAATTTTTATTCAATTATTAGAAAACAATCTAACAAATTCAAAATCATATGTGACTCAACCAATAATATT
AGAATTTAAAACGGATGTTTTTTTGATTATAAATCAAATTTTAAAACAATATAAAAAAGGTAAAATTATCAAAAATAATA
CAAATGAAATTATTTTAGAAATTGATAATAAATTAATTTCTATAACAAATTTAGATATCAATAAATTTCATTCGTATCAA
ATTGTTAATATTAATGAAAATAAAAATATTTATAACGAAAGGAATAGTTTAATTTTATTTGATTTAGTAAATTATATCAT
TGAAAAAAATCAAAATTCTATCAGACACATTAATTTTTGAACGATTCAAATGAGTGTAGTTAATTGAATTTATTTTATTA
CTTATAATTTTAACAATTCATATTTAATTGATCCAAATTGAAAAAAATATGTTTTTAAAATTAAAAAAGATGAATCTAAA
GGTGTAATTAGTACCAATTTATTACATAATTATGGTTTTGTGGATTTTGTTGTACAGTCTAAATCACAGAATTTTTTAAA
AGCTTATCGTGTTCAAGATGAAATTCTAAAATCTGTTTTAAATTTAGGCGATAACTTAAATAATGAATTTTTAGAAGAAA
TCATGAGAAAATATGATACATACAAAATAATTGATAGAGATCATAAATATTTAGTGATCAATATTGAATAA

Upstream 100 bases:

>100_bases
TGTATTATAACTATAATAAATTAGTGCTTTTTATTAAAGAATAATCACTAATAAATATTAAATGAATTATTAAAACAAAA
GATAAGGAATACAAGAAGGT

Downstream 100 bases:

>100_bases
ATTATAATATATAAAATATAAATAAAATCTTATTAACTTAAAATTTAAATTAGGAGATTATATGATTTTTTTAAAGAAAA
TAGAAGCACATGGGTTTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MDEQIFIQLLENNLTNSKSYVTQPIILEFKTDVFLIINQILKQYKKGKIIKNNTNEIILEIDNKLISITNLDINKFHSYQ
IVNINENKNIYNERNSLILFDLVNYIIEKNQNSIRHINFWTIQMSVVNWIYFITYNFNNSYLIDPNWKKYVFKIKKDESK
GVISTNLLHNYGFVDFVVQSKSQNFLKAYRVQDEILKSVLNLGDNLNNEFLEEIMRKYDTYKIIDRDHKYLVINIE

Sequences:

>Translated_236_residues
MDEQIFIQLLENNLTNSKSYVTQPIILEFKTDVFLIINQILKQYKKGKIIKNNTNEIILEIDNKLISITNLDINKFHSYQ
IVNINENKNIYNERNSLILFDLVNYIIEKNQNSIRHINF*TIQMSVVN*IYFITYNFNNSYLIDPN*KKYVFKIKKDESK
GVISTNLLHNYGFVDFVVQSKSQNFLKAYRVQDEILKSVLNLGDNLNNEFLEEIMRKYDTYKIIDRDHKYLVINIE
>Mature_236_residues
MDEQIFIQLLENNLTNSKSYVTQPIILEFKTDVFLIINQILKQYKKGKIIKNNTNEIILEIDNKLISITNLDINKFHSYQ
IVNINENKNIYNERNSLILFDLVNYIIEKNQNSIRHINF*TIQMSVVN*IYFITYNFNNSYLIDPN*KKYVFKIKKDESK
GVISTNLLHNYGFVDFVVQSKSQNFLKAYRVQDEILKSVLNLGDNLNNEFLEEIMRKYDTYKIIDRDHKYLVINIE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27685; Mature: 27685

Theoretical pI: Translated: 8.58; Mature: 8.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEQIFIQLLENNLTNSKSYVTQPIILEFKTDVFLIINQILKQYKKGKIIKNNTNEIILE
CCHHHHHHHHHCCCCCCCHHCCCCEEEEECCCHHHHHHHHHHHHHCCCEEECCCCEEEEE
IDNKLISITNLDINKFHSYQIVNINENKNIYNERNSLILFDLVNYIIEKNQNSIRHINFT
ECCEEEEEEECCCHHCCCEEEEEECCCCCCCCCCCCEEHHHHHHHHHHCCCCCEEEEEEE
IQMSVVNIYFITYNFNNSYLIDPNKKYVFKIKKDESKGVISTNLLHNYGFVDFVVQSKSQ
EEEEEEEEEEEEEECCCCEEECCCCEEEEEEEECCCCCEEEEHHHHHCCEEEEEEECCCH
NFLKAYRVQDEILKSVLNLGDNLNNEFLEEIMRKYDTYKIIDRDHKYLVINIE
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEECCCEEEEEEEC
>Mature Secondary Structure
MDEQIFIQLLENNLTNSKSYVTQPIILEFKTDVFLIINQILKQYKKGKIIKNNTNEIILE
CCHHHHHHHHHCCCCCCCHHCCCCEEEEECCCHHHHHHHHHHHHHCCCEEECCCCEEEEE
IDNKLISITNLDINKFHSYQIVNINENKNIYNERNSLILFDLVNYIIEKNQNSIRHINFT
ECCEEEEEEECCCHHCCCEEEEEECCCCCCCCCCCCEEHHHHHHHHHHCCCCCEEEEEEE
IQMSVVNIYFITYNFNNSYLIDPNKKYVFKIKKDESKGVISTNLLHNYGFVDFVVQSKSQ
EEEEEEEEEEEEEECCCCEEECCCCEEEEEEEECCCCCEEEEHHHHHCCEEEEEEECCCH
NFLKAYRVQDEILKSVLNLGDNLNNEFLEEIMRKYDTYKIIDRDHKYLVINIE
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEECCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11048724 [H]