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The map label for this gene is atpF

Identifier: 13357692

GI number: 13357692

Start: 176280

End: 176897

Strand: Reverse

Name: atpF

Synonym: UU135

Alternate gene names: 13357692

Gene position: 176897-176280 (Counterclockwise)

Preceding gene: 13357693

Following gene: 13357691

Centisome position: 23.53

GC content: 29.13

Gene sequence:

>618_bases
ATGAAATTAAATAAAAAGCATTTAGTAGCTATATTATCCGTTCTTTCTTTATCAATTATAGTTGTACCACTGTTGACTTC
ATGTACTGGTGATATTCCAGAATTAAATCCAGCAGAGATTATTAATACACTATTCCCTAATGTATGAGTATTTATAGCTC
AAGTTATTGCAATGTGTGTCGTTTTTTCATTAGTATTATGATTGGTATGAAAACCAACAAATAAAATGCTAGATAAAAGA
CGTGAATATATTGCTAAAGAAATTACAGATGCAGAAAATGCTAAACAAGAAGCTTTACAATATTTAGAAAACGCTAAATC
TGAACATTTAGCAGCACAAGCACAAACGTTAGAAATTATTGCAAAAGCTAAAAGTGAATCATTAACTTTACGTGAATCAT
TAGAAAAAGAAGCACGTGAAGCTGCTGATAAAATTATTAGTTCTGCTAAAATTAGCATTGCTAATGAACGTAGAGAAAAT
CTTGAACGTTTACAATCTGAAGCTCGTGAAGCTGCTTATATTGCAGCTGAAGCATTGATGAAAAAAGAATTGTCTAGAGA
AGATAATGATAAACTAGTTGATCAATTCATTAAAGAATTAGAAAATAATGAAAAATAA

Upstream 100 bases:

>100_bases
TTGTTTCTATCTTAATTATTTTCGTTGCTTAATTGTATTTTCTTTTTTTAAATAAATTTATTAAATAAAAATAATGAAAA
TTAATTAAGGGAGTAACGTT

Downstream 100 bases:

>100_bases
TTTATGAAATCTTCATTAAAACCAGTTGAAAAATACGCTTATTCAATTTTTGAAATTGCTAAAGAAGAAAAAAAATTAGA
TTTATACAAACATAATTTGG

Product: F0F1 ATP synthase subunit B

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b; ATPase subunit I; F-type ATPase subunit b; F-ATPase subunit b [H]

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MKLNKKHLVAILSVLSLSIIVVPLLTSCTGDIPELNPAEIINTLFPNVWVFIAQVIAMCVVFSLVLWLVWKPTNKMLDKR
REYIAKEITDAENAKQEALQYLENAKSEHLAAQAQTLEIIAKAKSESLTLRESLEKEAREAADKIISSAKISIANERREN
LERLQSEAREAAYIAAEALMKKELSREDNDKLVDQFIKELENNEK

Sequences:

>Translated_205_residues
MKLNKKHLVAILSVLSLSIIVVPLLTSCTGDIPELNPAEIINTLFPNV*VFIAQVIAMCVVFSLVL*LV*KPTNKMLDKR
REYIAKEITDAENAKQEALQYLENAKSEHLAAQAQTLEIIAKAKSESLTLRESLEKEAREAADKIISSAKISIANERREN
LERLQSEAREAAYIAAEALMKKELSREDNDKLVDQFIKELENNEK
>Mature_205_residues
MKLNKKHLVAILSVLSLSIIVVPLLTSCTGDIPELNPAEIINTLFPNV*VFIAQVIAMCVVFSLVL*LV*KPTNKMLDKR
REYIAKEITDAENAKQEALQYLENAKSEHLAAQAQTLEIIAKAKSESLTLRESLEKEAREAADKIISSAKISIANERREN
LERLQSEAREAAYIAAEALMKKELSREDNDKLVDQFIKELENNEK

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) [H]

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002146
- InterPro:   IPR005864 [H]

Pfam domain/function: PF00430 ATP-synt_B [H]

EC number: 3.6.3.14

Molecular weight: Translated: 22603; Mature: 22603

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLNKKHLVAILSVLSLSIIVVPLLTSCTGDIPELNPAEIINTLFPNVVFIAQVIAMCVV
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
FSLVLLVKPTNKMLDKRREYIAKEITDAENAKQEALQYLENAKSEHLAAQAQTLEIIAKA
HHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSESLTLRESLEKEAREAADKIISSAKISIANERRENLERLQSEAREAAYIAAEALMKKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSREDNDKLVDQFIKELENNEK
HCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKLNKKHLVAILSVLSLSIIVVPLLTSCTGDIPELNPAEIINTLFPNVVFIAQVIAMCVV
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
FSLVLLVKPTNKMLDKRREYIAKEITDAENAKQEALQYLENAKSEHLAAQAQTLEIIAKA
HHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSESLTLRESLEKEAREAADKIISSAKISIANERRENLERLQSEAREAAYIAAEALMKKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSREDNDKLVDQFIKELENNEK
HCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA