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The map label for this gene is atpH-2

Identifier: 13357691

GI number: 13357691

Start: 175737

End: 176276

Strand: Reverse

Name: atpH-2

Synonym: UU134

Alternate gene names: 13357691

Gene position: 176276-175737 (Counterclockwise)

Preceding gene: 13357692

Following gene: 13357690

Centisome position: 23.45

GC content: 24.07

Gene sequence:

>540_bases
ATGAAATCTTCATTAAAACCAGTTGAAAAATACGCTTATTCAATTTTTGAAATTGCTAAAGAAGAAAAAAAATTAGATTT
ATACAAACATAATTTGGAAACAATTAATTCTATCATTGAAGAGGTTCCAGCTTTTTTTGAAGCTGTTGGTGATCCTGCTC
GTGATCGTAATGAAAGAAAACAAATTGTGATTAAAAATCTAGAAGGTGAGATTGATATTTATTTAATTAGTTTAATTGAT
CTACTAATTGATGTTAAATCGGTTAAACTACTTAAAAAAATAGTTTTAAAAGCTTTGGATTTTGTTAATGAAGCTTTAAG
TGTTAAAAAAGTTTTAATAACAACTGCTTATGAATTAACAAAAAATCAAATTGATCGCCTTCTGCAATCTTTAAAAAAGA
AATATGTGTGTGAAAAAATAGAACCAATTGTTGTTGTTGATAAATCAATTATTGGAGGACTTTCAATTAATTTTGAATCG
CAAGTTTTAGATAATAGTTTAAAAACTAAATTATTTAATATTGTAAAAAAGGTAAATTAG

Upstream 100 bases:

>100_bases
TGCAGCTGAAGCATTGATGAAAAAAGAATTGTCTAGAGAAGATAATGATAAACTAGTTGATCAATTCATTAAAGAATTAG
AAAATAATGAAAAATAATTT

Downstream 100 bases:

>100_bases
GAAGTAATTATGCAAAGTAATACTAAACTAGCAAAATATTCAAAAATTATCGCCAATCGTTTAAAAGCATATTCTAATCA
AACTCGTTTTATTGAAATTA

Product: ATP synthase delta chain N-term

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(1) sector subunit delta; F-type ATPase subunit delta; F-ATPase subunit delta

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MKSSLKPVEKYAYSIFEIAKEEKKLDLYKHNLETINSIIEEVPAFFEAVGDPARDRNERKQIVIKNLEGEIDIYLISLID
LLIDVKSVKLLKKIVLKALDFVNEALSVKKVLITTAYELTKNQIDRLLQSLKKKYVCEKIEPIVVVDKSIIGGLSINFES
QVLDNSLKTKLFNIVKKVN

Sequences:

>Translated_179_residues
MKSSLKPVEKYAYSIFEIAKEEKKLDLYKHNLETINSIIEEVPAFFEAVGDPARDRNERKQIVIKNLEGEIDIYLISLID
LLIDVKSVKLLKKIVLKALDFVNEALSVKKVLITTAYELTKNQIDRLLQSLKKKYVCEKIEPIVVVDKSIIGGLSINFES
QVLDNSLKTKLFNIVKKVN
>Mature_179_residues
MKSSLKPVEKYAYSIFEIAKEEKKLDLYKHNLETINSIIEEVPAFFEAVGDPARDRNERKQIVIKNLEGEIDIYLISLID
LLIDVKSVKLLKKIVLKALDFVNEALSVKKVLITTAYELTKNQIDRLLQSLKKKYVCEKIEPIVVVDKSIIGGLSINFES
QVLDNSLKTKLFNIVKKVN

Specific function: This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction

COG id: COG0712

COG function: function code C; F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase delta chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPD_UREP2 (B1AIC3)

Other databases:

- EMBL:   CP000942
- RefSeq:   YP_001752217.1
- ProteinModelPortal:   B1AIC3
- GeneID:   6155406
- GenomeReviews:   CP000942_GR
- KEGG:   upa:UPA3_0140
- HOGENOM:   HBG734362
- OMA:   NNIEVDA
- ProtClustDB:   CLSK2298782
- BioCyc:   UPAR505682:UPA3_0140-MONOMER
- HAMAP:   MF_01416
- InterPro:   IPR000711
- Gene3D:   G3DSA:1.10.520.20
- PANTHER:   PTHR11910
- PRINTS:   PR00125
- TIGRFAMs:   TIGR01145

Pfam domain/function: PF00213 OSCP; SSF47928 ATPsynt_OSCP

EC number: 3.6.3.14

Molecular weight: Translated: 20479; Mature: 20479

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: PS00389 ATPASE_DELTA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSSLKPVEKYAYSIFEIAKEEKKLDLYKHNLETINSIIEEVPAFFEAVGDPARDRNERK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
QIVIKNLEGEIDIYLISLIDLLIDVKSVKLLKKIVLKALDFVNEALSVKKVLITTAYELT
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KNQIDRLLQSLKKKYVCEKIEPIVVVDKSIIGGLSINFESQVLDNSLKTKLFNIVKKVN
HHHHHHHHHHHHHHHHHHHCCCEEEECHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKSSLKPVEKYAYSIFEIAKEEKKLDLYKHNLETINSIIEEVPAFFEAVGDPARDRNERK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
QIVIKNLEGEIDIYLISLIDLLIDVKSVKLLKKIVLKALDFVNEALSVKKVLITTAYELT
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KNQIDRLLQSLKKKYVCEKIEPIVVVDKSIIGGLSINFESQVLDNSLKTKLFNIVKKVN
HHHHHHHHHHHHHHHHHHHCCCEEEECHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA