Definition Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome.
Accession NC_002162
Length 751,719

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 13357682

GI number: 13357682

Start: 164502

End: 165686

Strand: Reverse

Name: Not Available

Synonym: UU125

Alternate gene names: NA

Gene position: 165686-164502 (Counterclockwise)

Preceding gene: 13357683

Following gene: 13357674

Centisome position: 22.04

GC content: 20.51

Gene sequence:

>1185_bases
ATGAAAAAAAATAAATATAAACTTCTTATTAAATCACTAGTTATTACATCTTTTTTAGTTACTACTTCAAGTGTTATTGT
AGCTTGTACTAATAAAGAAAAAGAGCAACATTTAACTGAATTAAAAAAATTATCTCAACATGCAAAACAAATATATAATG
AAATTAAAACTAATGAATTATTTAAAAAGGAGGCTTCTGTTTTAAATGATCAAATTAATAAAGTTTTAAAAATTAATGAA
CAAAATAATTTAGATGTCATTACTAAAAATTATAATGATTTAAAAAAATTATTAGATGAAATTCAAGAGAAAATTTCTAA
AGAAAAAGAAAAAGAAAAGCAACAAAACGCTTATCTTAATAAAGAAATTAACATTAAATTAGAAAATTTAAATCAAATAG
TTAATCATAATTTATTAAAAGGAAATAAAGAATCATTTTTTAATCAAATTATTAATTTCACTCCAATTACAACAGAAATT
CAAACTATTATCAATCAAAATCAAAATCTTTTAGATTTCAAAAATGAAGAACTTGAATTAAAATTAAAAAATTTAGACCT
TTTCATTAAAGAATTAGATCATAAATTTAAAAATATAATAGATCAACTATTTAATATTGAAGATTCATACATTAATAAGT
TTCTAAAATTTATTAATAACCAGGACTTTATTAAGGATCAAAAATATCAAGAAAGAGAAAAGTTTAATCCGCAAGAATAT
TTAGAATTAACAAAATCTATTCAAAGTAGTTTTAATAAATTAAAAAACGTTACTATCAATTCAAACCTAGACCAATACCT
AAATTCACTTAATTTAGTGTTATTATCTTTAACTAATGAAACTAAAGCCTTTTTTACTAAATTTGAAGATCAAATTAAAA
AATATTTTAAGTGAATTGTATATGGTAGAGATGATACACTAACAAAAGCCTTTAATCGAATTGTTGAAGAACAAAAAAGA
AATGAATTTATAGAGCAAACAGAAAAAGCTTTATTAACTTTTCCCATGGAAATTAATCAAAAATTTAAAATGTTCGTTGA
TTTTTTTACATTAAAAAATGATAAAAACGAAACTGAATATCAAAAAATCTGAAAGTCAAAACACAACGAAGTTAATAAAG
TCTGATTTGGTATTGCAGAGTGTTTTGCAACTGGAAAATGTACAGACAAAAATAAACCATCATAA

Upstream 100 bases:

>100_bases
ACAATTTCGCTAATCGTACATCTTTAATTCAACAAATCAAACAATTAGCCTATTTATATCCAGAAAAATATGAAGATATT
TATAAATAGAAAGGAATCTT

Downstream 100 bases:

>100_bases
AAAAATAACTAGGGTTTTATTTTAGTGCGATAATGCGCTAAGATAATTCCTGTTGCTACACCAACATTTAAAGATTGTAC
ATCACCAAACATATCAATTC

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MKKNKYKLLIKSLVITSFLVTTSSVIVACTNKEKEQHLTELKKLSQHAKQIYNEIKTNELFKKEASVLNDQINKVLKINE
QNNLDVITKNYNDLKKLLDEIQEKISKEKEKEKQQNAYLNKEINIKLENLNQIVNHNLLKGNKESFFNQIINFTPITTEI
QTIINQNQNLLDFKNEELELKLKNLDLFIKELDHKFKNIIDQLFNIEDSYINKFLKFINNQDFIKDQKYQEREKFNPQEY
LELTKSIQSSFNKLKNVTINSNLDQYLNSLNLVLLSLTNETKAFFTKFEDQIKKYFKWIVYGRDDTLTKAFNRIVEEQKR
NEFIEQTEKALLTFPMEINQKFKMFVDFFTLKNDKNETEYQKIWKSKHNEVNKVWFGIAECFATGKCTDKNKPS

Sequences:

>Translated_394_residues
MKKNKYKLLIKSLVITSFLVTTSSVIVACTNKEKEQHLTELKKLSQHAKQIYNEIKTNELFKKEASVLNDQINKVLKINE
QNNLDVITKNYNDLKKLLDEIQEKISKEKEKEKQQNAYLNKEINIKLENLNQIVNHNLLKGNKESFFNQIINFTPITTEI
QTIINQNQNLLDFKNEELELKLKNLDLFIKELDHKFKNIIDQLFNIEDSYINKFLKFINNQDFIKDQKYQEREKFNPQEY
LELTKSIQSSFNKLKNVTINSNLDQYLNSLNLVLLSLTNETKAFFTKFEDQIKKYFK*IVYGRDDTLTKAFNRIVEEQKR
NEFIEQTEKALLTFPMEINQKFKMFVDFFTLKNDKNETEYQKI*KSKHNEVNKV*FGIAECFATGKCTDKNKPS
>Mature_394_residues
MKKNKYKLLIKSLVITSFLVTTSSVIVACTNKEKEQHLTELKKLSQHAKQIYNEIKTNELFKKEASVLNDQINKVLKINE
QNNLDVITKNYNDLKKLLDEIQEKISKEKEKEKQQNAYLNKEINIKLENLNQIVNHNLLKGNKESFFNQIINFTPITTEI
QTIINQNQNLLDFKNEELELKLKNLDLFIKELDHKFKNIIDQLFNIEDSYINKFLKFINNQDFIKDQKYQEREKFNPQEY
LELTKSIQSSFNKLKNVTINSNLDQYLNSLNLVLLSLTNETKAFFTKFEDQIKKYFK*IVYGRDDTLTKAFNRIVEEQKR
NEFIEQTEKALLTFPMEINQKFKMFVDFFTLKNDKNETEYQKI*KSKHNEVNKV*FGIAECFATGKCTDKNKPS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46329; Mature: 46329

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNKYKLLIKSLVITSFLVTTSSVIVACTNKEKEQHLTELKKLSQHAKQIYNEIKTNEL
CCCCHHHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FKKEASVLNDQINKVLKINEQNNLDVITKNYNDLKKLLDEIQEKISKEKEKEKQQNAYLN
HHHHHHHHHHHHHHHEECCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KEINIKLENLNQIVNHNLLKGNKESFFNQIINFTPITTEIQTIINQNQNLLDFKNEELEL
CEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCEE
KLKNLDLFIKELDHKFKNIIDQLFNIEDSYINKFLKFINNQDFIKDQKYQEREKFNPQEY
EHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHH
LELTKSIQSSFNKLKNVTINSNLDQYLNSLNLVLLSLTNETKAFFTKFEDQIKKYFKIVY
HHHHHHHHHHHHHHHCCEECCCHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHC
GRDDTLTKAFNRIVEEQKRNEFIEQTEKALLTFPMEINQKFKMFVDFFTLKNDKNETEYQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHH
KIKSKHNEVNKVFGIAECFATGKCTDKNKPS
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKKNKYKLLIKSLVITSFLVTTSSVIVACTNKEKEQHLTELKKLSQHAKQIYNEIKTNEL
CCCCHHHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FKKEASVLNDQINKVLKINEQNNLDVITKNYNDLKKLLDEIQEKISKEKEKEKQQNAYLN
HHHHHHHHHHHHHHHEECCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KEINIKLENLNQIVNHNLLKGNKESFFNQIINFTPITTEIQTIINQNQNLLDFKNEELEL
CEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCEE
KLKNLDLFIKELDHKFKNIIDQLFNIEDSYINKFLKFINNQDFIKDQKYQEREKFNPQEY
EHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHH
LELTKSIQSSFNKLKNVTINSNLDQYLNSLNLVLLSLTNETKAFFTKFEDQIKKYFKIVY
HHHHHHHHHHHHHHHCCEECCCHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHC
GRDDTLTKAFNRIVEEQKRNEFIEQTEKALLTFPMEINQKFKMFVDFFTLKNDKNETEYQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHH
KIKSKHNEVNKVFGIAECFATGKCTDKNKPS
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA